2p9m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2p9m" [edit=sysop:move=sysop])
Current revision (08:27, 30 October 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2p9m.png|left|200px]]
 
-
{{STRUCTURE_2p9m| PDB=2p9m | SCENE= }}
+
==Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661==
-
 
+
<StructureSection load='2p9m' size='340' side='right'caption='[[2p9m]], [[Resolution|resolution]] 2.59&Aring;' scene=''>
-
===Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2p9m]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P9M FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.59&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[2p9m]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_dsm_2661 Methanocaldococcus jannaschii dsm 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9M OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p9m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p9m OCA], [https://pdbe.org/2p9m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p9m RCSB], [https://www.ebi.ac.uk/pdbsum/2p9m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p9m ProSAT], [https://www.topsan.org/Proteins/RSGI/2p9m TOPSAN]</span></td></tr>
-
[[Category: Methanocaldococcus jannaschii dsm 2661]]
+
</table>
-
[[Category: Charz, J.]]
+
== Function ==
-
[[Category: Chen, L.]]
+
[https://www.uniprot.org/uniprot/Y922_METJA Y922_METJA]
-
[[Category: Ebihara, A.]]
+
== Evolutionary Conservation ==
-
[[Category: Fu, Z-Q.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: II, J T.Swindell.]]
+
Check<jmol>
-
[[Category: Kuramitsu, S.]]
+
<jmolCheckbox>
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p9/2p9m_consurf.spt"</scriptWhenChecked>
-
[[Category: Rose, J P.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Shinkai, A.]]
+
</jmolCheckbox>
-
[[Category: Wang, B-C.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p9m ConSurf].
-
[[Category: Yokoyama, S.]]
+
<div style="clear:both"></div>
-
[[Category: Zhao, M.]]
+
__TOC__
-
[[Category: Zhu, J.]]
+
</StructureSection>
-
[[Category: Methanocaldococcus jannaschii]]
+
[[Category: Large Structures]]
-
[[Category: Mj0922]]
+
[[Category: Methanocaldococcus jannaschii DSM 2661]]
-
[[Category: Protein structure initiative]]
+
[[Category: Charz J]]
-
[[Category: Psi]]
+
[[Category: Chen L]]
-
[[Category: Riken structural genomics/proteomics initiative]]
+
[[Category: Ebihara A]]
-
[[Category: Rsgi]]
+
[[Category: Fu Z-Q]]
-
[[Category: Secsg]]
+
[[Category: Kuramitsu S]]
-
[[Category: Southeast collaboratory for structural genomic]]
+
[[Category: Rose JP]]
-
[[Category: Structural genomic]]
+
[[Category: Shinkai A]]
-
[[Category: Unknown function]]
+
[[Category: Swindell II JT]]
 +
[[Category: Wang B-C]]
 +
[[Category: Yokoyama S]]
 +
[[Category: Zhao M]]
 +
[[Category: Zhu J]]

Current revision

Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661

PDB ID 2p9m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2p9m"
Personal tools