1wuh

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[[Image:1wuh.gif|left|200px]]<br /><applet load="1wuh" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="1wuh, resolution 1.24&Aring;" />
 
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'''Three-Dimensional Structure Of The Ni-A State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F'''<br />
 
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==About this Structure==
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==Three-Dimensional Structure Of The Ni-A State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F==
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1WUH is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris] with <scene name='pdbligand=MG:'>MG</scene>, <scene name='pdbligand=SF4:'>SF4</scene>, <scene name='pdbligand=F3S:'>F3S</scene>, <scene name='pdbligand=NFC:'>NFC</scene> and <scene name='pdbligand=MPD:'>MPD</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Cytochrome-c3_hydrogenase Cytochrome-c3 hydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.2.1 1.12.2.1] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WUH OCA].
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<StructureSection load='1wuh' size='340' side='right'caption='[[1wuh]], [[Resolution|resolution]] 1.24&Aring;' scene=''>
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[[Category: Cytochrome-c3 hydrogenase]]
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== Structural highlights ==
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[[Category: Desulfovibrio vulgaris]]
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<table><tr><td colspan='2'>[[1wuh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._'Miyazaki_F' Desulfovibrio vulgaris str. 'Miyazaki F']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WUH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WUH FirstGlance]. <br>
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[[Category: Protein complex]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.24&#8491;</td></tr>
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[[Category: Higuchi, Y.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=NFC:NI-FE+ACTIVE+CENTER+A-FORM'>NFC</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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[[Category: Hirota, S.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wuh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wuh OCA], [https://pdbe.org/1wuh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wuh RCSB], [https://www.ebi.ac.uk/pdbsum/1wuh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wuh ProSAT]</span></td></tr>
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[[Category: Kano, K.]]
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</table>
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[[Category: Kato, T.]]
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== Function ==
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[[Category: Komori, H.]]
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[https://www.uniprot.org/uniprot/PHNS_DESVM PHNS_DESVM] Catalyzes the reversible oxidoreduction of molecular hydrogen, in conjunction with a specific electron acceptor, cytochrome c3.
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[[Category: Nakahara, A.]]
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== Evolutionary Conservation ==
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[[Category: Ogata, H.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Shibata, N.]]
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Check<jmol>
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[[Category: F3S]]
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<jmolCheckbox>
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[[Category: MG]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wu/1wuh_consurf.spt"</scriptWhenChecked>
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[[Category: MPD]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: NFC]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: SF4]]
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</jmolCheckbox>
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[[Category: [nife]hydrogenase]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wuh ConSurf].
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[[Category: high resolution crystal structure]]
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<div style="clear:both"></div>
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[[Category: ni-a state]]
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__TOC__
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[[Category: oxidoreductase]]
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</StructureSection>
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[[Category: unready state]]
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[[Category: Desulfovibrio vulgaris str. 'Miyazaki F']]
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[[Category: Large Structures]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:48:13 2008''
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[[Category: Higuchi Y]]
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[[Category: Hirota S]]
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[[Category: Kano K]]
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[[Category: Kato T]]
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[[Category: Komori H]]
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[[Category: Nakahara A]]
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[[Category: Ogata H]]
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[[Category: Shibata N]]

Current revision

Three-Dimensional Structure Of The Ni-A State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F

PDB ID 1wuh

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