This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ijz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:12, 30 August 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ijz.png|left|200px]]
 
-
{{STRUCTURE_2ijz| PDB=2ijz | SCENE= }}
+
==Crystal structure of aminopeptidase==
-
 
+
<StructureSection load='2ijz' size='340' side='right'caption='[[2ijz]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-
===Crystal structure of aminopeptidase===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2ijz]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IJZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IJZ FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ijz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ijz OCA], [https://pdbe.org/2ijz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ijz RCSB], [https://www.ebi.ac.uk/pdbsum/2ijz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ijz ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2ijz TOPSAN]</span></td></tr>
-
[[2ijz]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IJZ OCA].
+
</table>
-
[[Category: Pseudomonas aeruginosa]]
+
== Function ==
-
[[Category: Burley, S K.]]
+
[https://www.uniprot.org/uniprot/APEB_PSEAE APEB_PSEAE]
-
[[Category: Min, T.]]
+
== Evolutionary Conservation ==
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Shapiro, L.]]
+
Check<jmol>
-
[[Category: Hydrolase]]
+
<jmolCheckbox>
-
[[Category: New york sgx research center for structural genomic]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ij/2ijz_consurf.spt"</scriptWhenChecked>
-
[[Category: Nysgxrc]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Protein structure initiative]]
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ijz ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Psi]]
+
[[Category: Burley SK]]
-
[[Category: Putative aminopeptidase 2]]
+
[[Category: Min T]]
-
[[Category: Structural genomic]]
+
[[Category: Shapiro L]]

Current revision

Crystal structure of aminopeptidase

PDB ID 2ijz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools