This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2f5g

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:50, 13 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2f5g.png|left|200px]]
 
-
{{STRUCTURE_2f5g| PDB=2f5g | SCENE= }}
+
==Crystal structure of IS200 transposase==
-
 
+
<StructureSection load='2f5g' size='340' side='right'caption='[[2f5g]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
===Crystal structure of IS200 transposase===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2f5g]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus Saccharolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F5G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F5G FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_16340015}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f5g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f5g OCA], [https://pdbe.org/2f5g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f5g RCSB], [https://www.ebi.ac.uk/pdbsum/2f5g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f5g ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[2f5g]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F5G OCA].
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q97Y68_SACS2 Q97Y68_SACS2]
-
==Reference==
+
== Evolutionary Conservation ==
-
<ref group="xtra">PMID:016340015</ref><references group="xtra"/>
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Sulfolobus solfataricus]]
+
Check<jmol>
-
[[Category: Kang, J Y.]]
+
<jmolCheckbox>
-
[[Category: Kim, D J.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f5/2f5g_consurf.spt"</scriptWhenChecked>
-
[[Category: Kim, H S.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Kim, K H.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Lee, H H.]]
+
</jmolCheckbox>
-
[[Category: Suh, S W.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f5g ConSurf].
-
[[Category: Yoon, J Y.]]
+
<div style="clear:both"></div>
-
[[Category: Dimer]]
+
__TOC__
-
[[Category: Gene regulation]]
+
</StructureSection>
-
[[Category: Stem-loop binding]]
+
[[Category: Large Structures]]
 +
[[Category: Saccharolobus solfataricus]]
 +
[[Category: Kang JY]]
 +
[[Category: Kim DJ]]
 +
[[Category: Kim HS]]
 +
[[Category: Kim KH]]
 +
[[Category: Lee HH]]
 +
[[Category: Suh SW]]
 +
[[Category: Yoon JY]]

Current revision

Crystal structure of IS200 transposase

PDB ID 2f5g

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools