1wy1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:01, 25 October 2023) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1wy1.gif|left|200px]]<br /><applet load="1wy1" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1wy1, resolution 1.80&Aring;" />
 
-
'''Crystal Structure of the PH0671 protein from Pyrococcus horikoshii OT3'''<br />
 
-
==About this Structure==
+
==Crystal Structure of the PH0671 protein from Pyrococcus horikoshii OT3==
-
1WY1 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii_ot3 Pyrococcus horikoshii ot3] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WY1 OCA].
+
<StructureSection load='1wy1' size='340' side='right'caption='[[1wy1]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
[[Category: Pyrococcus horikoshii ot3]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[1wy1]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WY1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WY1 FirstGlance]. <br>
-
[[Category: Kunishima, N.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
[[Category: Mizutani, H.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wy1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wy1 OCA], [https://pdbe.org/1wy1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wy1 RCSB], [https://www.ebi.ac.uk/pdbsum/1wy1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wy1 ProSAT], [https://www.topsan.org/Proteins/RSGI/1wy1 TOPSAN]</span></td></tr>
-
[[Category: MG]]
+
</table>
-
[[Category: riken structural genomics/proteomics initiative]]
+
== Function ==
-
[[Category: rsgi]]
+
[https://www.uniprot.org/uniprot/O58404_PYRHO O58404_PYRHO]
-
[[Category: structural genomics]]
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:49:19 2008''
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wy/1wy1_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wy1 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Pyrococcus horikoshii OT3]]
 +
[[Category: Kunishima N]]
 +
[[Category: Mizutani H]]

Current revision

Crystal Structure of the PH0671 protein from Pyrococcus horikoshii OT3

PDB ID 1wy1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools