2qyb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:28, 17 October 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qyb.png|left|200px]]
 
-
{{STRUCTURE_2qyb| PDB=2qyb | SCENE= }}
+
==Crystal structure of the GAF domain region of putative membrane protein from Geobacter sulfurreducens PCA==
-
 
+
<StructureSection load='2qyb' size='340' side='right'caption='[[2qyb]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
===Crystal structure of the GAF domain region of putative membrane protein from Geobacter sulfurreducens PCA===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2qyb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacter_sulfurreducens_PCA Geobacter sulfurreducens PCA]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QYB FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[2qyb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacter_sulfurreducens_pca Geobacter sulfurreducens pca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QYB OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qyb OCA], [https://pdbe.org/2qyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qyb RCSB], [https://www.ebi.ac.uk/pdbsum/2qyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qyb ProSAT], [https://www.topsan.org/Proteins/MCSG/2qyb TOPSAN]</span></td></tr>
-
[[Category: Geobacter sulfurreducens pca]]
+
</table>
-
[[Category: Clancy, S.]]
+
== Function ==
-
[[Category: Duggan, E.]]
+
[https://www.uniprot.org/uniprot/Q74D90_GEOSL Q74D90_GEOSL]
-
[[Category: Joachimiak, A.]]
+
== Evolutionary Conservation ==
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Nocek, B.]]
+
Check<jmol>
-
[[Category: Domain of putative membrane protein]]
+
<jmolCheckbox>
-
[[Category: Gaf domain]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qy/2qyb_consurf.spt"</scriptWhenChecked>
-
[[Category: Mcsg]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Membrane protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Midwest center for structural genomic]]
+
</jmolCheckbox>
-
[[Category: Protein structure initiative]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qyb ConSurf].
-
[[Category: Psi-2]]
+
<div style="clear:both"></div>
-
[[Category: Structural genomic]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Geobacter sulfurreducens PCA]]
 +
[[Category: Large Structures]]
 +
[[Category: Clancy S]]
 +
[[Category: Duggan E]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Nocek B]]

Current revision

Crystal structure of the GAF domain region of putative membrane protein from Geobacter sulfurreducens PCA

PDB ID 2qyb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools