This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3cex

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:53, 27 January 2022) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3cex.png|left|200px]]
 
-
{{STRUCTURE_3cex| PDB=3cex | SCENE= }}
+
==Crystal structure of the conserved protein of locus EF_3021 from Enterococcus faecalis==
-
 
+
<StructureSection load='3cex' size='340' side='right'caption='[[3cex]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===Crystal structure of the conserved protein of locus EF_3021 from Enterococcus faecalis===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3cex]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Entfa Entfa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CEX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CEX FirstGlance]. <br>
-
 
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
==About this Structure==
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[3cex]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis_v583 Enterococcus faecalis v583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CEX OCA].
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">EF_3021 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226185 ENTFA])</td></tr>
-
[[Category: Enterococcus faecalis v583]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cex FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cex OCA], [https://pdbe.org/3cex PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cex RCSB], [https://www.ebi.ac.uk/pdbsum/3cex PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cex ProSAT], [https://www.topsan.org/Proteins/MCSG/3cex TOPSAN]</span></td></tr>
-
[[Category: Cuff, M E.]]
+
</table>
-
[[Category: Joachimiak, A.]]
+
== Evolutionary Conservation ==
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Moy, S.]]
+
Check<jmol>
-
[[Category: Wu, R.]]
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ce/3cex_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cex ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Entfa]]
 +
[[Category: Large Structures]]
 +
[[Category: Cuff, M E]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Structural genomic]]
 +
[[Category: Moy, S]]
 +
[[Category: Wu, R]]
[[Category: Ef_3021]]
[[Category: Ef_3021]]
[[Category: Enterococcus faecali]]
[[Category: Enterococcus faecali]]
[[Category: Mcsg]]
[[Category: Mcsg]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
[[Category: Unknown function]]
[[Category: Unknown function]]

Current revision

Crystal structure of the conserved protein of locus EF_3021 from Enterococcus faecalis

PDB ID 3cex

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools