This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3c8i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:33, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3c8i.png|left|200px]]
 
-
{{STRUCTURE_3c8i| PDB=3c8i | SCENE= }}
+
==Crystal structure of a putative membrane protein from Corynebacterium diphtheriae==
-
 
+
<StructureSection load='3c8i' size='340' side='right'caption='[[3c8i]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
===Crystal structure of a putative membrane protein from Corynebacterium diphtheriae===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3c8i]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_diphtheriae_NCTC_13129 Corynebacterium diphtheriae NCTC 13129]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C8I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C8I FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c8i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c8i OCA], [https://pdbe.org/3c8i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c8i RCSB], [https://www.ebi.ac.uk/pdbsum/3c8i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c8i ProSAT], [https://www.topsan.org/Proteins/MCSG/3c8i TOPSAN]</span></td></tr>
-
[[3c8i]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Corynebacterium_diphtheriae_nctc_13129 Corynebacterium diphtheriae nctc 13129]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C8I OCA].
+
</table>
-
[[Category: Corynebacterium diphtheriae nctc 13129]]
+
== Function ==
-
[[Category: Clancy, S.]]
+
[https://www.uniprot.org/uniprot/Q6NIK4_CORDI Q6NIK4_CORDI]
-
[[Category: Hatzos, C.]]
+
== Evolutionary Conservation ==
-
[[Category: Joachimiak, A.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
Check<jmol>
-
[[Category: Zhang, R.]]
+
<jmolCheckbox>
-
[[Category: Corynebacterium diphtheriae]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c8/3c8i_consurf.spt"</scriptWhenChecked>
-
[[Category: Mcsg]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Membrane protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Midwest center for structural genomic]]
+
</jmolCheckbox>
-
[[Category: Protein structure initiative]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c8i ConSurf].
-
[[Category: Psi]]
+
<div style="clear:both"></div>
-
[[Category: Putative membrane protein]]
+
__TOC__
-
[[Category: Structural genomic]]
+
</StructureSection>
 +
[[Category: Corynebacterium diphtheriae NCTC 13129]]
 +
[[Category: Large Structures]]
 +
[[Category: Clancy S]]
 +
[[Category: Hatzos C]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Zhang R]]

Current revision

Crystal structure of a putative membrane protein from Corynebacterium diphtheriae

PDB ID 3c8i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools