3co5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (22:33, 26 March 2025) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3co5.png|left|200px]]
 
-
{{STRUCTURE_3co5| PDB=3co5 | SCENE= }}
+
==Crystal structure of sigma-54 interaction domain of putative transcriptional response regulator from Neisseria gonorrhoeae==
-
 
+
<StructureSection load='3co5' size='340' side='right'caption='[[3co5]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
===Crystal structure of sigma-54 interaction domain of putative transcriptional response regulator from Neisseria gonorrhoeae===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3co5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_gonorrhoeae_FA_1090 Neisseria gonorrhoeae FA 1090]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CO5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CO5 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[3co5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Neisseria_gonorrhoeae_fa_1090 Neisseria gonorrhoeae fa 1090]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CO5 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3co5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3co5 OCA], [https://pdbe.org/3co5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3co5 RCSB], [https://www.ebi.ac.uk/pdbsum/3co5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3co5 ProSAT], [https://www.topsan.org/Proteins/MCSG/3co5 TOPSAN]</span></td></tr>
-
[[Category: Neisseria gonorrhoeae fa 1090]]
+
</table>
-
[[Category: Bigelow, L.]]
+
== Function ==
-
[[Category: Clancy, S.]]
+
[https://www.uniprot.org/uniprot/Q5F5Q1_NEIG1 Q5F5Q1_NEIG1]
-
[[Category: Hendricks, R.]]
+
== Evolutionary Conservation ==
-
[[Category: Joachimiak, A.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
Check<jmol>
-
[[Category: Osipiuk, J.]]
+
<jmolCheckbox>
-
[[Category: Apc89341 1]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/co/3co5_consurf.spt"</scriptWhenChecked>
-
[[Category: Mcsg]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Midwest center for structural genomic]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Protein structure initiative]]
+
</jmolCheckbox>
-
[[Category: Psi-2]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3co5 ConSurf].
-
[[Category: Sigma-54 interaction domain]]
+
<div style="clear:both"></div>
-
[[Category: Structural genomic]]
+
__TOC__
-
[[Category: Transcription regulator]]
+
</StructureSection>
-
[[Category: Transcriptional response regulator]]
+
[[Category: Large Structures]]
 +
[[Category: Neisseria gonorrhoeae FA 1090]]
 +
[[Category: Bigelow L]]
 +
[[Category: Clancy S]]
 +
[[Category: Hendricks R]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Osipiuk J]]

Current revision

Crystal structure of sigma-54 interaction domain of putative transcriptional response regulator from Neisseria gonorrhoeae

PDB ID 3co5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools