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3cz8

From Proteopedia

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[[Image:3cz8.png|left|200px]]
 
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{{STRUCTURE_3cz8| PDB=3cz8 | SCENE= }}
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==Crystal structure of putative sporulation-specific glycosylase ydhD from Bacillus subtilis==
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<StructureSection load='3cz8' size='340' side='right'caption='[[3cz8]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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===Crystal structure of putative sporulation-specific glycosylase ydhD from Bacillus subtilis===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3cz8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CZ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CZ8 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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==About this Structure==
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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[[3cz8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CZ8 OCA].
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cz8 OCA], [https://pdbe.org/3cz8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cz8 RCSB], [https://www.ebi.ac.uk/pdbsum/3cz8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cz8 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3cz8 TOPSAN]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/YDHD_BACSU YDHD_BACSU]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cz/3cz8_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cz8 ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
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[[Category: Almo, S C.]]
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[[Category: Large Structures]]
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[[Category: Burley, S K.]]
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[[Category: Almo SC]]
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[[Category: Chang, S.]]
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[[Category: Burley SK]]
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[[Category: Maletic, M.]]
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[[Category: Chang S]]
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
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[[Category: Maletic M]]
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[[Category: Patskovsky, Y.]]
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[[Category: Patskovsky Y]]
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[[Category: Romero, R.]]
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[[Category: Romero R]]
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[[Category: Rutter, M.]]
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[[Category: Rutter M]]
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[[Category: Sauder, J M.]]
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[[Category: Sauder JM]]
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[[Category: Smith, D.]]
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[[Category: Smith D]]
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[[Category: Wasserman, S R.]]
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[[Category: Wasserman SR]]
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[[Category: Carbohydrate metabolism]]
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[[Category: Glycosidase]]
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[[Category: Hydrolase]]
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[[Category: New york sgx research center for structural genomic]]
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[[Category: Nysgxrc]]
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[[Category: Polysaccharide degradation]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Sporulation]]
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[[Category: Structural genomic]]
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[[Category: Uncharacterized protein]]
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Current revision

Crystal structure of putative sporulation-specific glycosylase ydhD from Bacillus subtilis

PDB ID 3cz8

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