This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2rh3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2rh3" [edit=sysop:move=sysop])
Current revision (09:22, 21 February 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2rh3.png|left|200px]]
 
-
{{STRUCTURE_2rh3| PDB=2rh3 | SCENE= }}
+
==Crystal structure of plasmid pTiC58 VirC2==
-
 
+
<StructureSection load='2rh3' size='340' side='right'caption='[[2rh3]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
===Crystal structure of plasmid pTiC58 VirC2===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2rh3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RH3 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_19482939}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rh3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rh3 OCA], [https://pdbe.org/2rh3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rh3 RCSB], [https://www.ebi.ac.uk/pdbsum/2rh3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rh3 ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[2rh3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RH3 OCA].
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/VIRC2_AGRFC VIRC2_AGRFC]
-
==Reference==
+
== Evolutionary Conservation ==
-
<ref group="xtra">PMID:019482939</ref><references group="xtra"/>
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rh/2rh3_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rh3 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Agrobacterium tumefaciens]]
[[Category: Agrobacterium tumefaciens]]
-
[[Category: Glover, J N.M.]]
+
[[Category: Large Structures]]
-
[[Category: Lu, J.]]
+
[[Category: Glover JNM]]
-
[[Category: Crown gall tumor]]
+
[[Category: Lu J]]
-
[[Category: Dna binding protein]]
+
-
[[Category: Protein]]
+
-
[[Category: Ribbon-helix-helix]]
+

Current revision

Crystal structure of plasmid pTiC58 VirC2

PDB ID 2rh3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools