1x7v

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:30, 9 October 2024) (edit) (undo)
 
(17 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1x7v.gif|left|200px]]<br /><applet load="1x7v" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1x7v, resolution 1.78&Aring;" />
 
-
'''Crystal structure of PA3566 from Pseudomonas aeruginosa'''<br />
 
-
==About this Structure==
+
==Crystal structure of PA3566 from Pseudomonas aeruginosa==
-
1X7V is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X7V OCA].
+
<StructureSection load='1x7v' size='340' side='right'caption='[[1x7v]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[1x7v]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X7V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X7V FirstGlance]. <br>
-
The X-ray crystal structure of PA3566 from Pseudomonas aureginosa at 1.8 A resolution., Sanders DA, Walker JR, Skarina T, Savchenko A, Proteins. 2005 Oct 1;61(1):209-12. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16049913 16049913]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x7v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x7v OCA], [https://pdbe.org/1x7v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x7v RCSB], [https://www.ebi.ac.uk/pdbsum/1x7v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x7v ProSAT], [https://www.topsan.org/Proteins/MCSG/1x7v TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9HY51_PSEAE Q9HY51_PSEAE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x7/1x7v_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x7v ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Single protein]]
+
[[Category: Edwards A]]
-
[[Category: Edwards, A.]]
+
[[Category: Gorodichtchenskaia E]]
-
[[Category: Gorodichtchenskaia, E.]]
+
[[Category: Joachimiak A]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Sanders DA]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Savchenko A]]
-
[[Category: Sanders, D A.]]
+
[[Category: Skarina T]]
-
[[Category: Savchenko, A.]]
+
[[Category: Walker JR]]
-
[[Category: Skarina, T.]]
+
-
[[Category: Walker, J R.]]
+
-
[[Category: SO4]]
+
-
[[Category: alpha-beta plait]]
+
-
[[Category: mcsg]]
+
-
[[Category: midwest center for structural genomics]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomics]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:51:53 2008''
+

Current revision

Crystal structure of PA3566 from Pseudomonas aeruginosa

PDB ID 1x7v

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools