This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3clc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:36, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3clc.png|left|200px]]
 
-
{{STRUCTURE_3clc| PDB=3clc | SCENE= }}
+
==Crystal Structure of the Restriction-Modification Controller Protein C.Esp1396I Tetramer in Complex with its Natural 35 Base-Pair Operator==
-
 
+
<StructureSection load='3clc' size='340' side='right'caption='[[3clc]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
===Crystal Structure of the Restriction-Modification Controller Protein C.Esp1396I Tetramer in Complex with its Natural 35 Base-Pair Operator===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3clc]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterobacter_sp._RFL1396 Enterobacter sp. RFL1396]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CLC FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_18644840}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3clc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3clc OCA], [https://pdbe.org/3clc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3clc RCSB], [https://www.ebi.ac.uk/pdbsum/3clc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3clc ProSAT]</span></td></tr>
-
[[3clc]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacter_sp. Enterobacter sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLC OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/Q8GGH0_9ENTR Q8GGH0_9ENTR]
-
<ref group="xtra">PMID:018644840</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Enterobacter sp.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Ball, N.]]
+
Check<jmol>
-
[[Category: Kneale, G G.]]
+
<jmolCheckbox>
-
[[Category: McGeehan, J E.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cl/3clc_consurf.spt"</scriptWhenChecked>
-
[[Category: Ravelli, R B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Streeter, S D.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Thresh, S J.]]
+
</jmolCheckbox>
-
[[Category: Dna-bending]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3clc ConSurf].
-
[[Category: Helix-turn-helix]]
+
<div style="clear:both"></div>
-
[[Category: Protein-dna complex]]
+
__TOC__
-
[[Category: Transcription regulator-dna complex]]
+
</StructureSection>
-
[[Category: Transcriptional regulator]]
+
[[Category: Enterobacter sp. RFL1396]]
 +
[[Category: Large Structures]]
 +
[[Category: Ball N]]
 +
[[Category: Kneale GG]]
 +
[[Category: McGeehan JE]]
 +
[[Category: Ravelli RB]]
 +
[[Category: Streeter SD]]
 +
[[Category: Thresh SJ]]

Current revision

Crystal Structure of the Restriction-Modification Controller Protein C.Esp1396I Tetramer in Complex with its Natural 35 Base-Pair Operator

PDB ID 3clc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools