2vu7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:33, 6 November 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2vu7.png|left|200px]]
 
-
{{STRUCTURE_2vu7| PDB=2vu7 | SCENE= }}
+
==Atomic resolution (1.08 A) structure of purified thaumatin I grown in sodium meso-tartrate at 4 C==
-
 
+
<StructureSection load='2vu7' size='340' side='right'caption='[[2vu7]], [[Resolution|resolution]] 1.08&Aring;' scene=''>
-
===ATOMIC RESOLUTION (1.08 A) STRUCTURE OF PURIFIED THAUMATIN I GROWN IN SODIUM MESO-TARTRATE AT 4 C===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2vu7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thaumatococcus_daniellii Thaumatococcus daniellii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VU7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VU7 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.08&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SRT:S,R+MESO-TARTARIC+ACID'>SRT</scene></td></tr>
-
[[2vu7]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VU7 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vu7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vu7 OCA], [https://pdbe.org/2vu7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vu7 RCSB], [https://www.ebi.ac.uk/pdbsum/2vu7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vu7 ProSAT]</span></td></tr>
-
[[Category: Asherie, N.]]
+
</table>
-
[[Category: Ginsberg, C.]]
+
== Function ==
-
[[Category: Jakoncic, J.]]
+
[https://www.uniprot.org/uniprot/THM1_THADA THM1_THADA] Taste-modifying protein; intensely sweet-tasting. It is 100000 times sweeter than sucrose on a molar basis.
-
[[Category: Chirality]]
+
== Evolutionary Conservation ==
-
[[Category: Crystallization]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Cytoplasmic vesicle]]
+
Check<jmol>
-
[[Category: Dl-tartaric acid]]
+
<jmolCheckbox>
-
[[Category: Microbatch]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vu/2vu7_consurf.spt"</scriptWhenChecked>
-
[[Category: Plant protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Sweet protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Taste-modifying protein]]
+
</jmolCheckbox>
-
[[Category: Temperature]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vu7 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Thaumatococcus daniellii]]
 +
[[Category: Asherie N]]
 +
[[Category: Ginsberg C]]
 +
[[Category: Jakoncic J]]

Current revision

Atomic resolution (1.08 A) structure of purified thaumatin I grown in sodium meso-tartrate at 4 C

PDB ID 2vu7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools