3dm8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:42, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3dm8.png|left|200px]]
 
-
{{STRUCTURE_3dm8| PDB=3dm8 | SCENE= }}
+
==Crystal Structure of Putative Isomerase from Rhodopseudomonas palustris==
-
 
+
<StructureSection load='3dm8' size='340' side='right'caption='[[3dm8]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
===Crystal Structure of Putative Isomerase from Rhodopseudomonas palustris===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3dm8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DM8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DM8 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CE9:DODECYL+NONA+ETHYLENE+GLYCOL+ETHER'>CE9</scene></td></tr>
-
[[3dm8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DM8 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dm8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dm8 OCA], [https://pdbe.org/3dm8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dm8 RCSB], [https://www.ebi.ac.uk/pdbsum/3dm8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dm8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3dm8 TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6N1Q6_RHOPA Q6N1Q6_RHOPA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dm/3dm8_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dm8 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Rhodopseudomonas palustris]]
[[Category: Rhodopseudomonas palustris]]
-
[[Category: Chruszcz, M.]]
+
[[Category: Chruszcz M]]
-
[[Category: Cymborowski, M.]]
+
[[Category: Cymborowski M]]
-
[[Category: Edwards, A M.]]
+
[[Category: Edwards AM]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Joachimiak A]]
-
[[Category: Kagan, O.]]
+
[[Category: Kagan O]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Minor W]]
-
[[Category: Minor, W.]]
+
[[Category: Savchenko A]]
-
[[Category: Savchenko, A.]]
+
[[Category: Skarina T]]
-
[[Category: Skarina, T.]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Putative isomerase]]
+
-
[[Category: Sira]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal Structure of Putative Isomerase from Rhodopseudomonas palustris

PDB ID 3dm8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools