2ywv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:09, 25 October 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ywv.png|left|200px]]
 
-
{{STRUCTURE_2ywv| PDB=2ywv | SCENE= }}
+
==Crystal structure of SAICAR synthetase from Geobacillus kaustophilus==
 +
<StructureSection load='2ywv' size='340' side='right'caption='[[2ywv]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2ywv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YWV FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ywv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ywv OCA], [https://pdbe.org/2ywv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ywv RCSB], [https://www.ebi.ac.uk/pdbsum/2ywv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ywv ProSAT], [https://www.topsan.org/Proteins/RSGI/2ywv TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5L3D5_GEOKA Q5L3D5_GEOKA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/2ywv_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ywv ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of SAICAR synthetase from Geobacillus kaustophilus===
+
==See Also==
-
 
+
*[[SAICAR synthetase|SAICAR synthetase]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[2ywv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YWV OCA].
+
[[Category: Geobacillus kaustophilus]]
[[Category: Geobacillus kaustophilus]]
-
[[Category: Phosphoribosylaminoimidazolesuccinocarboxamide synthase]]
+
[[Category: Large Structures]]
-
[[Category: Baba, S.]]
+
[[Category: Baba S]]
-
[[Category: Kanagawa, M.]]
+
[[Category: Kanagawa M]]
-
[[Category: Kawai, G.]]
+
[[Category: Kawai G]]
-
[[Category: Kuramitsu, S.]]
+
[[Category: Kuramitsu S]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Sampei G]]
-
[[Category: Sampei, G.]]
+
[[Category: Yokoyama S]]
-
[[Category: Yokoyama, S.]]
+
-
[[Category: Adp complex]]
+
-
[[Category: Ligase]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+

Current revision

Crystal structure of SAICAR synthetase from Geobacillus kaustophilus

PDB ID 2ywv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools