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2qjo

From Proteopedia

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[[Image:2qjo.png|left|200px]]
 
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{{STRUCTURE_2qjo| PDB=2qjo | SCENE= }}
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==crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase (NadM) complexed with ADPRP and NAD from Synechocystis sp.==
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<StructureSection load='2qjo' size='340' side='right'caption='[[2qjo]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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===crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase (NadM) complexed with ADPRP and NAD from Synechocystis sp.===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2qjo]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803 Synechocystis sp. PCC 6803]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QJO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QJO FirstGlance]. <br>
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{{ABSTRACT_PUBMED_18275811}}
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=APR:ADENOSINE-5-DIPHOSPHORIBOSE'>APR</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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==About this Structure==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qjo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qjo OCA], [https://pdbe.org/2qjo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qjo RCSB], [https://www.ebi.ac.uk/pdbsum/2qjo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qjo ProSAT]</span></td></tr>
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[[2qjo]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QJO OCA].
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</table>
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== Function ==
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==Reference==
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[https://www.uniprot.org/uniprot/NADM_SYNY3 NADM_SYNY3] The Nudix hydrolase domain is active on ADP-ribose, (2')-phospho-ADP-ribose, IDP-ribose and NADPH.
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<ref group="xtra">PMID:018275811</ref><references group="xtra"/>
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== Evolutionary Conservation ==
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[[Category: Synechocystis sp.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Brautigan, C.]]
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Check<jmol>
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[[Category: Grishin, N V.]]
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<jmolCheckbox>
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[[Category: Huang, N.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qj/2qjo_consurf.spt"</scriptWhenChecked>
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[[Category: Magni, G.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Osterman, A.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Raffaelli, N.]]
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</jmolCheckbox>
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[[Category: Sorci, L.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qjo ConSurf].
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[[Category: Zhang, H.]]
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<div style="clear:both"></div>
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[[Category: Zhang, X.]]
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__TOC__
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[[Category: Hydrolase]]
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</StructureSection>
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[[Category: Transferase]]
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[[Category: Large Structures]]
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[[Category: Two individual domain]]
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[[Category: Synechocystis sp. PCC 6803]]
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[[Category: Brautigan C]]
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[[Category: Grishin NV]]
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[[Category: Huang N]]
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[[Category: Magni G]]
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[[Category: Osterman A]]
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[[Category: Raffaelli N]]
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[[Category: Sorci L]]
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[[Category: Zhang H]]
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[[Category: Zhang X]]

Current revision

crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase (NadM) complexed with ADPRP and NAD from Synechocystis sp.

PDB ID 2qjo

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