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2zif

From Proteopedia

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[[Image:2zif.png|left|200px]]
 
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{{STRUCTURE_2zif| PDB=2zif | SCENE= }}
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==Crystal Structure of TTHA0409, Putative DNA Modification Methylase from Thermus thermophilus HB8- Complexed with S-Adenosyl-L-Methionine==
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<StructureSection load='2zif' size='340' side='right'caption='[[2zif]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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===Crystal Structure of TTHA0409, Putative DNA Modification Methylase from Thermus thermophilus HB8- Complexed with S-Adenosyl-L-Methionine===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2zif]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZIF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZIF FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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==About this Structure==
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
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[[2zif]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZIF OCA].
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zif FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zif OCA], [https://pdbe.org/2zif PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zif RCSB], [https://www.ebi.ac.uk/pdbsum/2zif PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zif ProSAT]</span></td></tr>
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</table>
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==Reference==
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== Function ==
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<ref group="xtra">PMID:018618709</ref><references group="xtra"/>
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[https://www.uniprot.org/uniprot/Q5SL84_THET8 Q5SL84_THET8]
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[[Category: Thermus thermophilus]]
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== Evolutionary Conservation ==
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[[Category: Ishikawa, H.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Kuramitsu, S.]]
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Check<jmol>
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[[Category: Masui, R.]]
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<jmolCheckbox>
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[[Category: Morita, R.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zi/2zif_consurf.spt"</scriptWhenChecked>
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[[Category: Nakagawa, N.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Yokoyama, S.]]
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</jmolCheckbox>
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[[Category: Methyltransferase]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zif ConSurf].
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[[Category: Modification methylase]]
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<div style="clear:both"></div>
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[[Category: National project on protein structural and functional analyse]]
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__TOC__
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[[Category: Nppsfa]]
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</StructureSection>
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[[Category: Riken structural genomics/proteomics initiative]]
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[[Category: Large Structures]]
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[[Category: Rsgi]]
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[[Category: S-adenosylmethionine]]
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[[Category: Structural genomic]]
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[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
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[[Category: Transferase]]
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[[Category: Ishikawa H]]
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[[Category: Kuramitsu S]]
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[[Category: Masui R]]
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[[Category: Morita R]]
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[[Category: Nakagawa N]]
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[[Category: Yokoyama S]]

Current revision

Crystal Structure of TTHA0409, Putative DNA Modification Methylase from Thermus thermophilus HB8- Complexed with S-Adenosyl-L-Methionine

PDB ID 2zif

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