2zwi

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[[Image:2zwi.png|left|200px]]
 
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{{STRUCTURE_2zwi| PDB=2zwi | SCENE= }}
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==Crystal structure of alpha/beta-Galactoside alpha-2,3-Sialyltransferase from a Luminous Marine Bacterium, <I>Photobacterium phosphoreum</I>==
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<StructureSection load='2zwi' size='340' side='right'caption='[[2zwi]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2zwi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Photobacterium_phosphoreum Photobacterium phosphoreum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZWI FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C5P:CYTIDINE-5-MONOPHOSPHATE'>C5P</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zwi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zwi OCA], [https://pdbe.org/2zwi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zwi RCSB], [https://www.ebi.ac.uk/pdbsum/2zwi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zwi ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A5LHX0_PHOPO A5LHX0_PHOPO]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zw/2zwi_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zwi ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Alpha/beta-galactoside alpha2,3-sialyltransferase produced by Photobacterium phosphoreum JT-ISH-467 is a unique enzyme that catalyzes the transfer of N-acetylneuraminic acid residue from cytidine monophosphate N-acetylneuraminic acid to acceptor carbohydrate groups. The enzyme recognizes both mono- and di-saccharides as acceptor substrates, and can transfer Neu5Ac to both alpha-galactoside and beta-galactoside, efficiently. To elucidate the structural basis for the broad acceptor substrate specificity, we determined the crystal structure of the alpha2,3-sialyltransferase in complex with CMP. The overall structure belongs to the glycosyltransferase-B structural group. We could model a reasonable active conformation structure based on the crystal structure. The predicted structure suggested that the broad substrate specificity could be attributed to the wider entrance of the acceptor substrate binding site.
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===Crystal structure of alpha/beta-Galactoside alpha-2,3-Sialyltransferase from a Luminous Marine Bacterium, <I>Photobacterium phosphoreum</I>===
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Crystal structure of alpha/beta-galactoside alpha2,3-sialyltransferase from a luminous marine bacterium, Photobacterium phosphoreum.,Iwatani T, Okino N, Sakakura M, Kajiwara H, Takakura Y, Kimura M, Ito M, Yamamoto T, Kakuta Y FEBS Lett. 2009 Jun 18;583(12):2083-7. Epub 2009 May 23. PMID:19467231<ref>PMID:19467231</ref>
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{{ABSTRACT_PUBMED_19467231}}
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 2zwi" style="background-color:#fffaf0;"></div>
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==About this Structure==
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==See Also==
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[[2zwi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Photobacterium_phosphoreum Photobacterium phosphoreum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWI OCA].
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*[[Sialyltransferase 3D structures|Sialyltransferase 3D structures]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:019467231</ref><references group="xtra"/>
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__TOC__
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[[Category: Beta-galactoside alpha-2,3-sialyltransferase]]
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</StructureSection>
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[[Category: Photobacterium phosphoreum]]
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[[Category: Large Structures]]
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[[Category: Ichikawa, M.]]
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[[Category: Ito, M.]]
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[[Category: Iwatani, T.]]
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[[Category: Kajiwara, H.]]
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[[Category: Kakuta, Y.]]
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[[Category: Kimura, M.]]
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[[Category: Okino, N.]]
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[[Category: Sakakura, M.]]
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[[Category: Takakura, Y.]]
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[[Category: Yamamoto, T.]]
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[[Category: 3-sialyltransfease]]
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[[Category: Alpha-2]]
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[[Category: Glycosyltransferase]]
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[[Category: Jt-ish-467]]
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[[Category: Photobacterium phosphoreum]]
[[Category: Photobacterium phosphoreum]]
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[[Category: Transferase]]
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[[Category: Ichikawa M]]
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[[Category: Ito M]]
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[[Category: Iwatani T]]
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[[Category: Kajiwara H]]
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[[Category: Kakuta Y]]
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[[Category: Kimura M]]
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[[Category: Okino N]]
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[[Category: Sakakura M]]
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[[Category: Takakura Y]]
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[[Category: Yamamoto T]]

Current revision

Crystal structure of alpha/beta-Galactoside alpha-2,3-Sialyltransferase from a Luminous Marine Bacterium, Photobacterium phosphoreum

PDB ID 2zwi

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