2qlt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2qlt" [edit=sysop:move=sysop])
Current revision (09:16, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qlt.png|left|200px]]
 
-
{{STRUCTURE_2qlt| PDB=2qlt | SCENE= }}
+
==Crystal structure of an isoform of DL-glycerol-3-phosphatase, Rhr2p, from Saccharomyces cerevisiae==
-
 
+
<StructureSection load='2qlt' size='340' side='right'caption='[[2qlt]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
===Crystal structure of an isoform of DL-glycerol-3-phosphatase, Rhr2p, from Saccharomyces cerevisiae===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2qlt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QLT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QLT FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[2qlt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QLT OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qlt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qlt OCA], [https://pdbe.org/2qlt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qlt RCSB], [https://www.ebi.ac.uk/pdbsum/2qlt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qlt ProSAT], [https://www.topsan.org/Proteins/MCSG/2qlt TOPSAN]</span></td></tr>
-
[[Category: Saccharomyces cerevisiae]]
+
</table>
-
[[Category: Edwards, A.]]
+
== Function ==
-
[[Category: Evdokimova, E.]]
+
[https://www.uniprot.org/uniprot/GPP1_YEAST GPP1_YEAST] Major isoform of glycerol-1-phosphate phosphohydrolase involved in glycerol biosynthesis. Plays a role in osmoadaptation and required for adaptation to anaerobic conditions.<ref>PMID:8662716</ref> <ref>PMID:11058591</ref> <ref>PMID:15113568</ref> <ref>PMID:16358322</ref> <ref>PMID:18438874</ref>
-
[[Category: Joachimiak, A.]]
+
== Evolutionary Conservation ==
-
[[Category: Kudritska, M.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
Check<jmol>
-
[[Category: Savchenko, A.]]
+
<jmolCheckbox>
-
[[Category: Tan, K.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ql/2qlt_consurf.spt"</scriptWhenChecked>
-
[[Category: Apc7326]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Dl-glycerol-3-phosphatase isoform]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Hydrolase]]
+
</jmolCheckbox>
-
[[Category: Mcsg]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qlt ConSurf].
-
[[Category: Midwest center for structural genomic]]
+
<div style="clear:both"></div>
-
[[Category: Protein structure initiative]]
+
== References ==
-
[[Category: Psi-2]]
+
<references/>
-
[[Category: Rhr2p]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Structural genomic]]
+
[[Category: Edwards A]]
 +
[[Category: Evdokimova E]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Kudritska M]]
 +
[[Category: Savchenko A]]
 +
[[Category: Tan K]]

Current revision

Crystal structure of an isoform of DL-glycerol-3-phosphatase, Rhr2p, from Saccharomyces cerevisiae

PDB ID 2qlt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qlt"
Personal tools