1y0k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:40, 30 October 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1y0k.gif|left|200px]]<br /><applet load="1y0k" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1y0k, resolution 1.75&Aring;" />
 
-
'''Structure of Protein of Unknown Function PA4535 from Pseudomonas aeruginosa strain PAO1, Monooxygenase Superfamily'''<br />
 
-
==About this Structure==
+
==Structure of Protein of Unknown Function PA4535 from Pseudomonas aeruginosa strain PAO1, Monooxygenase Superfamily==
-
1Y0K is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y0K OCA].
+
<StructureSection load='1y0k' size='340' side='right'caption='[[1y0k]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
-
[[Category: Pseudomonas aeruginosa pao1]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[1y0k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y0K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y0K FirstGlance]. <br>
-
[[Category: Edwards, A.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
[[Category: Evdokimova, E.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Joachimiak, A.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y0k OCA], [https://pdbe.org/1y0k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y0k RCSB], [https://www.ebi.ac.uk/pdbsum/1y0k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y0k ProSAT], [https://www.topsan.org/Proteins/MCSG/1y0k TOPSAN]</span></td></tr>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</table>
-
[[Category: Nocek, B P.]]
+
== Function ==
-
[[Category: Savchenko, A.]]
+
[https://www.uniprot.org/uniprot/Q9HVP2_PSEAE Q9HVP2_PSEAE]
-
[[Category: hypothetical protein]]
+
== Evolutionary Conservation ==
-
[[Category: mcsg]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: midwest center for structural genomics]]
+
Check<jmol>
-
[[Category: protein structure initiative]]
+
<jmolCheckbox>
-
[[Category: pseudomonas aeuruginosa pao1]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y0/1y0k_consurf.spt"</scriptWhenChecked>
-
[[Category: psi]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: structural genomics]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:00:37 2008''
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y0k ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Pseudomonas aeruginosa PAO1]]
 +
[[Category: Edwards A]]
 +
[[Category: Evdokimova E]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Nocek BP]]
 +
[[Category: Savchenko A]]

Current revision

Structure of Protein of Unknown Function PA4535 from Pseudomonas aeruginosa strain PAO1, Monooxygenase Superfamily

PDB ID 1y0k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools