3df8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3df8" [edit=sysop:move=sysop])
Current revision (07:55, 9 October 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3df8.png|left|200px]]
 
-
{{STRUCTURE_3df8| PDB=3df8 | SCENE= }}
+
==The crystal structure of a possible HxlR family transcriptional factor from Thermoplasma volcanium GSS1==
-
 
+
<StructureSection load='3df8' size='340' side='right'caption='[[3df8]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-
===The crystal structure of a possible HxlR family transcriptional factor from Thermoplasma volcanium GSS1===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3df8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_volcanium Thermoplasma volcanium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DF8 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[3df8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermoplasma_volcanium Thermoplasma volcanium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF8 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3df8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3df8 OCA], [https://pdbe.org/3df8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3df8 RCSB], [https://www.ebi.ac.uk/pdbsum/3df8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3df8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3df8 TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q978X0_THEVO Q978X0_THEVO]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/df/3df8_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3df8 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Thermoplasma volcanium]]
[[Category: Thermoplasma volcanium]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Joachimiak A]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Moy S]]
-
[[Category: Moy, S.]]
+
[[Category: Tan K]]
-
[[Category: Tan, K.]]
+
[[Category: Tesar C]]
-
[[Category: Tesar, C.]]
+
-
[[Category: Apc89000]]
+
-
[[Category: Hxlr]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Transcription]]
+
-
[[Category: Transcriptional factor]]
+

Current revision

The crystal structure of a possible HxlR family transcriptional factor from Thermoplasma volcanium GSS1

PDB ID 3df8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools