This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2rbb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2rbb" [edit=sysop:move=sysop])
Current revision (18:48, 20 October 2021) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2rbb.png|left|200px]]
 
-
{{STRUCTURE_2rbb| PDB=2rbb | SCENE= }}
+
==Crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase family enzyme from Burkholderia phytofirmans PsJN==
 +
<StructureSection load='2rbb' size='340' side='right'caption='[[2rbb]], [[Resolution|resolution]] 1.82&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2rbb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_phytofirmans Burkholderia phytofirmans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RBB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RBB FirstGlance]. <br>
 +
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2qh0|2qh0]]</div></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BphytDRAFT_4892 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=398527 Burkholderia phytofirmans])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rbb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rbb OCA], [https://pdbe.org/2rbb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rbb RCSB], [https://www.ebi.ac.uk/pdbsum/2rbb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rbb ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2rbb TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rb/2rbb_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rbb ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase family enzyme from Burkholderia phytofirmans PsJN===
+
==See Also==
-
 
+
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
-
 
+
*[[Glyoxalase 3D structures|Glyoxalase 3D structures]]
-
==About this Structure==
+
__TOC__
-
[[2rbb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_phytofirmans Burkholderia phytofirmans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RBB OCA].
+
</StructureSection>
[[Category: Burkholderia phytofirmans]]
[[Category: Burkholderia phytofirmans]]
-
[[Category: Burley, S K.]]
+
[[Category: Large Structures]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Category: Burley, S K]]
-
[[Category: Rao, K N.]]
+
[[Category: Structural genomic]]
-
[[Category: Sauder, J M.]]
+
[[Category: Rao, K N]]
-
[[Category: Swaminathan, S.]]
+
[[Category: Sauder, J M]]
-
[[Category: 11003k]]
+
[[Category: Swaminathan, S]]
[[Category: Burkholderia phytofirman]]
[[Category: Burkholderia phytofirman]]
[[Category: Glyoxalase/bleomycin resistance protein/dioxygenase]]
[[Category: Glyoxalase/bleomycin resistance protein/dioxygenase]]
-
[[Category: New york sgx research center for structural genomic]]
+
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
-
[[Category: Nysgxrc]]
+
[[Category: Oxidoreductase]]
[[Category: Oxidoreductase]]
-
[[Category: Protein structure initiative]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
[[Category: Unknown function]]
[[Category: Unknown function]]

Current revision

Crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase family enzyme from Burkholderia phytofirmans PsJN

PDB ID 2rbb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools