3adp
From Proteopedia
(Difference between revisions)
m (Protected "3adp" [edit=sysop:move=sysop]) |
|||
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:3adp.png|left|200px]] | ||
| - | + | ==Crystal Structure of the Rabbit L-Gulonate 3-Dehydrogenase (NADH Form)== | |
| - | + | <StructureSection load='3adp' size='340' side='right'caption='[[3adp]], [[Resolution|resolution]] 1.85Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3adp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3a97 3a97] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2ep9 2ep9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ADP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ADP FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3adp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3adp OCA], [https://pdbe.org/3adp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3adp RCSB], [https://www.ebi.ac.uk/pdbsum/3adp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3adp ProSAT]</span></td></tr> |
| - | [[3adp]] is a 1 chain structure with sequence from [ | + | </table> |
| - | [[ | + | == Function == |
| + | [https://www.uniprot.org/uniprot/CRYL1_RABIT CRYL1_RABIT] Functions as crystallin in the rabbit eye lens. Has high L-gulonate 3-dehydrogenase activity. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ad/3adp_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3adp ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Oryctolagus cuniculus]] | [[Category: Oryctolagus cuniculus]] | ||
| - | [[Category: Asada | + | [[Category: Asada Y]] |
| - | [[Category: Hara | + | [[Category: Hara A]] |
| - | [[Category: Kunishima | + | [[Category: Kunishima N]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal Structure of the Rabbit L-Gulonate 3-Dehydrogenase (NADH Form)
| |||||||||||
