2z1k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2z1k" [edit=sysop:move=sysop])
Current revision (08:08, 23 October 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2z1k.png|left|200px]]
 
-
{{STRUCTURE_2z1k| PDB=2z1k | SCENE= }}
+
==Crystal Structure of Ttha1563 from Thermus thermophilus HB8==
 +
<StructureSection load='2z1k' size='340' side='right'caption='[[2z1k]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2z1k]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z1K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z1K FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=PRD_900009:alpha-maltotriose'>PRD_900009</scene>, <scene name='pdbligand=PRD_900012:beta-cyclodextrin'>PRD_900012</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z1k OCA], [https://pdbe.org/2z1k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z1k RCSB], [https://www.ebi.ac.uk/pdbsum/2z1k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z1k ProSAT], [https://www.topsan.org/Proteins/RSGI/2z1k TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5SI17_THET8 Q5SI17_THET8]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z1/2z1k_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z1k ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal Structure of Ttha1563 from Thermus thermophilus HB8===
+
==See Also==
-
 
+
*[[Amylase 3D structures|Amylase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[2z1k]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z1K OCA].
+
[[Category: Large Structures]]
-
[[Category: Pullulanase]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Thermus thermophilus]]
+
[[Category: Kuramitsu S]]
-
[[Category: Kuramitsu, S.]]
+
[[Category: Matsunaga E]]
-
[[Category: Matsunaga, E.]]
+
[[Category: Niwa H]]
-
[[Category: Niwa, H.]]
+
[[Category: Shimada A]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Yokoyama S]]
-
[[Category: Shimada, A.]]
+
-
[[Category: Yokoyama, S.]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+

Current revision

Crystal Structure of Ttha1563 from Thermus thermophilus HB8

PDB ID 2z1k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools