3dkz
From Proteopedia
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| - | [[Image:3dkz.png|left|200px]] | ||
| - | + | ==Crystal structure of the Q7W9W5_BORPA protein from Bordetella parapertussis. Northeast Structural Genomics Consortium target BpR208C.== | |
| - | + | <StructureSection load='3dkz' size='340' side='right'caption='[[3dkz]], [[Resolution|resolution]] 2.40Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3dkz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"acinetobacter_parapertussis"_(eldering_and_kendrick_1938)_steel_and_cowan_1964 "acinetobacter parapertussis" (eldering and kendrick 1938) steel and cowan 1964]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DKZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DKZ FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | == | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BPP1634 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=519 "Acinetobacter parapertussis" (Eldering and Kendrick 1938) Steel and Cowan 1964])</td></tr> |
| - | [[3dkz]] is a 2 chain structure with sequence from [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dkz OCA], [https://pdbe.org/3dkz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dkz RCSB], [https://www.ebi.ac.uk/pdbsum/3dkz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dkz ProSAT], [https://www.topsan.org/Proteins/NESGC/3dkz TOPSAN]</span></td></tr> |
| - | [[ | + | </table> |
| - | [[Category: Acton, T B | + | == Evolutionary Conservation == |
| - | [[Category: Ciccosanti, C | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: Foote, E L | + | Check<jmol> |
| - | [[Category: Hunt, J F | + | <jmolCheckbox> |
| - | [[Category: Mao, L | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dk/3dkz_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Montelione, G T | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Seetharaman, J | + | </jmolCheckbox> |
| - | [[Category: Su, M | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dkz ConSurf]. |
| - | [[Category: Tong, L | + | <div style="clear:both"></div> |
| - | [[Category: Vorobiev, S M | + | __TOC__ |
| - | [[Category: Wang, D | + | </StructureSection> |
| - | [[Category: Xiao, R | + | [[Category: Large Structures]] |
| + | [[Category: Acton, T B]] | ||
| + | [[Category: Ciccosanti, C]] | ||
| + | [[Category: Foote, E L]] | ||
| + | [[Category: Hunt, J F]] | ||
| + | [[Category: Mao, L]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Seetharaman, J]] | ||
| + | [[Category: Su, M]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Vorobiev, S M]] | ||
| + | [[Category: Wang, D]] | ||
| + | [[Category: Xiao, R]] | ||
[[Category: Borpa]] | [[Category: Borpa]] | ||
[[Category: Bpr208c]] | [[Category: Bpr208c]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
| - | [[Category: Northeast structural genomics consortium]] | ||
[[Category: Pf03061]] | [[Category: Pf03061]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
[[Category: Q7w9w5]] | [[Category: Q7w9w5]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Thioesterase superfamily]] | [[Category: Thioesterase superfamily]] | ||
Current revision
Crystal structure of the Q7W9W5_BORPA protein from Bordetella parapertussis. Northeast Structural Genomics Consortium target BpR208C.
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Categories: Large Structures | Acton, T B | Ciccosanti, C | Foote, E L | Hunt, J F | Mao, L | Montelione, G T | Structural genomic | Seetharaman, J | Su, M | Tong, L | Vorobiev, S M | Wang, D | Xiao, R | Borpa | Bpr208c | Hydrolase | Nesg | Pf03061 | PSI, Protein structure initiative | Q7w9w5 | Thioesterase superfamily
