2rgy

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:38, 30 October 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2rgy.png|left|200px]]
 
-
{{STRUCTURE_2rgy| PDB=2rgy | SCENE= }}
+
==Crystal structure of transcriptional regulator of LacI family from Burkhoderia phymatum==
-
 
+
<StructureSection load='2rgy' size='340' side='right'caption='[[2rgy]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
===Crystal structure of transcriptional regulator of LacI family from Burkhoderia phymatum===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RGY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RGY FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[2rgy]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_phymatum Burkholderia phymatum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RGY OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rgy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rgy OCA], [https://pdbe.org/2rgy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rgy RCSB], [https://www.ebi.ac.uk/pdbsum/2rgy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rgy ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2rgy TOPSAN]</span></td></tr>
-
[[Category: Burkholderia phymatum]]
+
</table>
-
[[Category: Agarwal, R.]]
+
== Evolutionary Conservation ==
-
[[Category: Burley, S K.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
Check<jmol>
-
[[Category: Swaminathan, S.]]
+
<jmolCheckbox>
-
[[Category: 11011j]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rg/2rgy_consurf.spt"</scriptWhenChecked>
-
[[Category: Dna-binding]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Laci family]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: New york sgx research center for structural genomic]]
+
</jmolCheckbox>
-
[[Category: Nysgxrc]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rgy ConSurf].
-
[[Category: Protein structure initiative]]
+
<div style="clear:both"></div>
-
[[Category: Psi-2]]
+
__TOC__
-
[[Category: Structural genomic]]
+
</StructureSection>
-
[[Category: Sugar binding protein]]
+
[[Category: Large Structures]]
-
[[Category: Transcription]]
+
[[Category: Agarwal R]]
-
[[Category: Transcription regulation]]
+
[[Category: Burley SK]]
-
[[Category: Transcription regulator]]
+
[[Category: Swaminathan S]]
-
[[Category: Transctiptional regulator]]
+

Current revision

Crystal structure of transcriptional regulator of LacI family from Burkhoderia phymatum

PDB ID 2rgy

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools