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1yj1
From Proteopedia
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| - | [[Image:1yj1.gif|left|200px]]<br /><applet load="1yj1" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1yj1, resolution 1.30Å" /> | ||
| - | '''X-ray Crystal Structure of a Chemically Synthesized [D-Gln35]Ubiquitin'''<br /> | ||
| - | == | + | ==X-ray Crystal Structure of a Chemically Synthesized [D-Gln35]Ubiquitin== |
| - | + | <StructureSection load='1yj1' size='340' side='right'caption='[[1yj1]], [[Resolution|resolution]] 1.30Å' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[1yj1]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YJ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YJ1 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DGN:D-GLUTAMINE'>DGN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yj1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yj1 OCA], [https://pdbe.org/1yj1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yj1 RCSB], [https://www.ebi.ac.uk/pdbsum/1yj1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yj1 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yj/1yj1_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yj1 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | == | + | ==See Also== |
| - | + | *[[3D structures of ubiquitin|3D structures of ubiquitin]] | |
| - | [[Category: | + | __TOC__ |
| - | [[Category: Bang | + | </StructureSection> |
| - | [[Category: Kent | + | [[Category: Homo sapiens]] |
| - | [[Category: Kossiakoff | + | [[Category: Large Structures]] |
| - | [[Category: Makhatadze | + | [[Category: Bang D]] |
| - | [[Category: Tereshko | + | [[Category: Kent SB]] |
| - | + | [[Category: Kossiakoff AA]] | |
| - | + | [[Category: Makhatadze GI]] | |
| - | + | [[Category: Tereshko V]] | |
| - | + | ||
| - | + | ||
Current revision
X-ray Crystal Structure of a Chemically Synthesized [D-Gln35]Ubiquitin
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