3e3x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (22:34, 26 March 2025) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3e3x.png|left|200px]]
 
-
{{STRUCTURE_3e3x| PDB=3e3x | SCENE= }}
+
==The C-terminal part of BipA protein from Vibrio parahaemolyticus RIMD 2210633==
-
 
+
<StructureSection load='3e3x' size='340' side='right'caption='[[3e3x]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
===The C-terminal part of BipA protein from Vibrio parahaemolyticus RIMD 2210633===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3e3x]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E3X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E3X FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene>, <scene name='pdbligand=MLZ:N-METHYL-LYSINE'>MLZ</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[3e3x]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E3X OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e3x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e3x OCA], [https://pdbe.org/3e3x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e3x RCSB], [https://www.ebi.ac.uk/pdbsum/3e3x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e3x ProSAT], [https://www.topsan.org/Proteins/MCSG/3e3x TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9L5X8_VIBPH Q9L5X8_VIBPH]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e3/3e3x_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e3x ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Vibrio parahaemolyticus]]
[[Category: Vibrio parahaemolyticus]]
-
[[Category: Clancy, S.]]
+
[[Category: Clancy S]]
-
[[Category: Duggan, E.]]
+
[[Category: Duggan E]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Joachimiak A]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Mulligan R]]
-
[[Category: Mulligan, R.]]
+
[[Category: Nocek B]]
-
[[Category: Nocek, B.]]
+
-
[[Category: Bipa protein]]
+
-
[[Category: Gtp-binding]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi2]]
+
-
[[Category: Structural genomic]]
+

Current revision

The C-terminal part of BipA protein from Vibrio parahaemolyticus RIMD 2210633

PDB ID 3e3x

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools