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3edp
From Proteopedia
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| - | [[Image:3edp.png|left|200px]] | ||
| - | + | ==The crystal structure of the protein lin2111 (functionally unknown) from Listeria innocua Clip11262== | |
| - | + | <StructureSection load='3edp' size='340' side='right'caption='[[3edp]], [[Resolution|resolution]] 2.09Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3edp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"listeria_innocua"_seeliger_and_schoofs_1979 "listeria innocua" seeliger and schoofs 1979]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EDP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EDP FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | |
| - | == | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[3edp]] is a 2 chain structure with sequence from [ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lin2111 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1642 "Listeria innocua" Seeliger and Schoofs 1979])</td></tr> |
| - | [[Category: Listeria innocua]] | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3edp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3edp OCA], [https://pdbe.org/3edp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3edp RCSB], [https://www.ebi.ac.uk/pdbsum/3edp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3edp ProSAT], [https://www.topsan.org/Proteins/MCSG/3edp TOPSAN]</span></td></tr> |
| - | [[Category: Gu, M | + | </table> |
| - | [[Category: Jaurequi, L | + | == Evolutionary Conservation == |
| - | [[Category: Joachimiak, A | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: | + | Check<jmol> |
| - | [[Category: Tan, K | + | <jmolCheckbox> |
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ed/3edp_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3edp ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Listeria innocua seeliger and schoofs 1979]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Gu, M]] | ||
| + | [[Category: Jaurequi, L]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Tan, K]] | ||
[[Category: Apc88337]] | [[Category: Apc88337]] | ||
[[Category: Dna-binding]] | [[Category: Dna-binding]] | ||
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[[Category: Listeria innocua clip11262]] | [[Category: Listeria innocua clip11262]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
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[[Category: Transcription]] | [[Category: Transcription]] | ||
[[Category: Transcription regulation]] | [[Category: Transcription regulation]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Current revision
The crystal structure of the protein lin2111 (functionally unknown) from Listeria innocua Clip11262
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Categories: Listeria innocua seeliger and schoofs 1979 | Large Structures | Gu, M | Jaurequi, L | Joachimiak, A | Structural genomic | Tan, K | Apc88337 | Dna-binding | Lin2111 | Listeria innocua clip11262 | Mcsg | PSI, Protein structure initiative | Transcription | Transcription regulation | Unknown function
