3dzm
From Proteopedia
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- | [[Image:3dzm.png|left|200px]] | ||
- | + | ==Crystal structure of a major outer membrane protein from Thermus thermophilus HB27== | |
+ | <StructureSection load='3dzm' size='340' side='right'caption='[[3dzm]], [[Resolution|resolution]] 2.80Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[3dzm]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DZM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DZM FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.801Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dzm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dzm OCA], [https://pdbe.org/3dzm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dzm RCSB], [https://www.ebi.ac.uk/pdbsum/3dzm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dzm ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q72JD8_THET2 Q72JD8_THET2] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The thermophilic eubacterium Thermus thermophilus belongs to one of the oldest branches of evolution and has a multilayered cell envelope that differs from that of modern Gram-negative bacteria. Its outer membrane contains integral outer membrane proteins (OMPs), of which only a few are characterized. TtoA, a new beta-barrel OMP, was identified by searching the genome sequence of strain HB27 for the presence of a C-terminal signature sequence. The structure of TtoA was determined to a resolution of 2.8 A, representing the first crystal structure of an OMP from a thermophilic bacterium. TtoA consists of an eight-stranded beta-barrel with a large extracellular part to which a divalent cation is bound. A five-stranded extracellular beta-sheet protrudes out of the membrane-embedded transmembrane barrel and is stabilized by a disulfide bridge. The edge of this beta-sheet forms crystal contacts that could mimic interactions with other proteins. In modern Gram-negative bacteria, the C-terminal signature sequence of OMPs is required for binding to an Omp85 family protein as a prerequisite for its assembly. We present hints that a similar assembly pathway exists in T. thermophilus by an in vitro binding assay, where unfolded TtoA binds to the Thermus Omp85 family protein TtOmp85, while a mutant without the signature sequence does not. | ||
- | + | Crystal structure of a major outer membrane protein from Thermus thermophilus HB27.,Brosig A, Nesper J, Boos W, Welte W, Diederichs K J Mol Biol. 2009 Feb 6;385(5):1445-55. Epub 2008 Dec 10. PMID:19101566<ref>PMID:19101566</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | <div class="pdbe-citations 3dzm" style="background-color:#fffaf0;"></div> | |
- | + | == References == | |
- | + | <references/> | |
- | + | __TOC__ | |
- | < | + | </StructureSection> |
- | + | [[Category: Large Structures]] | |
- | + | [[Category: Thermus thermophilus HB27]] | |
- | [[Category: | + | [[Category: Brosig A]] |
- | + | [[Category: Diederichs K]] | |
- | + | ||
- | [[Category: Thermus thermophilus | + | |
- | [[Category: | + | |
- | [[Category: | + |
Current revision
Crystal structure of a major outer membrane protein from Thermus thermophilus HB27
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