1yph

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:42, 30 October 2024) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1yph.gif|left|200px]]<br /><applet load="1yph" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1yph, resolution 1.34&Aring;" />
 
-
'''High resolution structure of bovine alpha-chymotrypsin'''<br />
 
-
==About this Structure==
+
==High resolution structure of bovine alpha-chymotrypsin==
-
1YPH is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Chymotrypsin Chymotrypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.1 3.4.21.1] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YPH OCA].
+
<StructureSection load='1yph' size='340' side='right'caption='[[1yph]], [[Resolution|resolution]] 1.34&Aring;' scene=''>
-
[[Category: Bos taurus]]
+
== Structural highlights ==
-
[[Category: Chymotrypsin]]
+
<table><tr><td colspan='2'>[[1yph]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YPH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YPH FirstGlance]. <br>
-
[[Category: Protein complex]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.34&#8491;</td></tr>
-
[[Category: Galunsky, B.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[Category: Kasche, V.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yph FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yph OCA], [https://pdbe.org/1yph PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yph RCSB], [https://www.ebi.ac.uk/pdbsum/1yph PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yph ProSAT]</span></td></tr>
-
[[Category: Lamzin, V S.]]
+
</table>
-
[[Category: Razeto, A.]]
+
== Function ==
-
[[Category: Wilson, K S.]]
+
[https://www.uniprot.org/uniprot/CTRA_BOVIN CTRA_BOVIN]
-
[[Category: SO4]]
+
== Evolutionary Conservation ==
-
[[Category: serine protease]]
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yp/1yph_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yph ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:07:42 2008''
+
==See Also==
 +
*[[Chymotrypsin 3D structures|Chymotrypsin 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bos taurus]]
 +
[[Category: Large Structures]]
 +
[[Category: Galunsky B]]
 +
[[Category: Kasche V]]
 +
[[Category: Lamzin VS]]
 +
[[Category: Razeto A]]
 +
[[Category: Wilson KS]]

Current revision

High resolution structure of bovine alpha-chymotrypsin

PDB ID 1yph

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools