This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1z6u
From Proteopedia
(Difference between revisions)
| (12 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1z6u.gif|left|200px]]<br /><applet load="1z6u" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1z6u, resolution 2.10Å" /> | ||
| - | '''Np95-like ring finger protein isoform b [Homo sapiens]'''<br /> | ||
| - | == | + | ==Np95-like ring finger protein isoform b [Homo sapiens]== |
| - | + | <StructureSection load='1z6u' size='340' side='right'caption='[[1z6u]], [[Resolution|resolution]] 2.10Å' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[1z6u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z6U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z6U FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z6u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z6u OCA], [https://pdbe.org/1z6u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z6u RCSB], [https://www.ebi.ac.uk/pdbsum/1z6u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z6u ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Disease == | ||
| + | [https://www.uniprot.org/uniprot/UHRF2_HUMAN UHRF2_HUMAN] Associated with various cancers. DNA copy number loss is found in multiple kinds of malignancies originating from the brain, breast, stomach, kidney, hematopoietic tissue and lung. | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/UHRF2_HUMAN UHRF2_HUMAN] E3 ubiquitin-protein ligase that is an intermolecular hub protein in the cell cycle network. Through cooperative DNA and histone binding, may contribute to a tighter epigenetic control of gene expression in differentiated cells. Ubiquitinates cyclins, CCND1 and CCNE1, in an apparently phosphorylation-independent manner and induces G1 arrest. Also ubiquitinates PCNP leading to its degradation by the proteasome. E3 SUMO-, but not ubiquitin-, protein ligase for ZNF131.<ref>PMID:12176013</ref> <ref>PMID:15178429</ref> <ref>PMID:14741369</ref> <ref>PMID:15361834</ref> <ref>PMID:21952639</ref> <ref>PMID:23404503</ref> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z6/1z6u_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z6u ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | + | [[Category: Arrowsmith C]] | |
| - | [[Category: Arrowsmith | + | [[Category: Avvakumov GV]] |
| - | [[Category: Avvakumov | + | [[Category: Bochkarev A]] |
| - | [[Category: Bochkarev | + | [[Category: Dhe-Paganon S]] |
| - | [[Category: Dhe- | + | [[Category: Edwards A]] |
| - | [[Category: Edwards | + | [[Category: Mackenzie F]] |
| - | [[Category: Mackenzie | + | [[Category: Newman EM]] |
| - | [[Category: Newman | + | [[Category: Sundstrom M]] |
| - | + | [[Category: Walker JR]] | |
| - | [[Category: Sundstrom | + | [[Category: Xue S]] |
| - | [[Category: Walker | + | |
| - | [[Category: Xue | + | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Np95-like ring finger protein isoform b [Homo sapiens]
| |||||||||||
Categories: Homo sapiens | Large Structures | Arrowsmith C | Avvakumov GV | Bochkarev A | Dhe-Paganon S | Edwards A | Mackenzie F | Newman EM | Sundstrom M | Walker JR | Xue S

