This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2o2z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:47, 25 January 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2o2z.png|left|200px]]
 
-
{{STRUCTURE_2o2z| PDB=2o2z | SCENE= }}
+
==Crystal structure of a protein member of the upf0052 family (bh3568) from bacillus halodurans at 2.60 A resolution==
-
 
+
<StructureSection load='2o2z' size='340' side='right'caption='[[2o2z]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
===Crystal structure of a protein member of the upf0052 family (bh3568) from bacillus halodurans at 2.60 A resolution===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2o2z]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkalihalobacillus_halodurans Alkalihalobacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O2Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O2Z FirstGlance]. <br>
-
 
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o2z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o2z OCA], [https://pdbe.org/2o2z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o2z RCSB], [https://www.ebi.ac.uk/pdbsum/2o2z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o2z ProSAT], [https://www.topsan.org/Proteins/JCSG/2o2z TOPSAN]</span></td></tr>
-
[[2o2z]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O2Z OCA].
+
</table>
-
[[Category: Bacillus halodurans]]
+
== Function ==
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
[https://www.uniprot.org/uniprot/GNGF_HALH5 GNGF_HALH5] Required for morphogenesis under gluconeogenic growth conditions.[HAMAP-Rule:MF_00973]
-
[[Category: Jcsg]]
+
== Evolutionary Conservation ==
-
[[Category: Joint center for structural genomic]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Nad-binding protein]]
+
Check<jmol>
-
[[Category: Protein structure initiative]]
+
<jmolCheckbox>
-
[[Category: Psi-2]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o2/2o2z_consurf.spt"</scriptWhenChecked>
-
[[Category: Structural genomic]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2o2z ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Alkalihalobacillus halodurans]]
 +
[[Category: Large Structures]]

Current revision

Crystal structure of a protein member of the upf0052 family (bh3568) from bacillus halodurans at 2.60 A resolution

PDB ID 2o2z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools