1zfi

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[[Image:1zfi.gif|left|200px]]<br /><applet load="1zfi" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="1zfi" />
 
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'''Solution structure of the leech carboxypeptidase inhibitor'''<br />
 
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==Overview==
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==Solution structure of the leech carboxypeptidase inhibitor==
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<StructureSection load='1zfi' size='340' side='right'caption='[[1zfi]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1zfi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Hirudo_medicinalis Hirudo medicinalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZFI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZFI FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zfi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zfi OCA], [https://pdbe.org/1zfi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zfi RCSB], [https://www.ebi.ac.uk/pdbsum/1zfi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zfi ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MCPI_HIRME MCPI_HIRME] Tightly binding, competitive inhibitor of different types of pancreatic-like carboxypeptidases.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
The III-A intermediate constitutes the major rate-determining step in the oxidative folding of leech carboxypeptidase inhibitor (LCI). In this work, III-A has been directly purified from the folding reaction and structurally characterized by NMR spectroscopy. This species, containing three native disulfides, displays a highly native-like structure; however, it lacks some secondary structure elements, making it more flexible than native LCI. III-A represents a structurally determined example of a disulfide-insecure intermediate; direct oxidation of this species to the fully native protein seems to be restricted by the burial of its two free cysteine residues inside a native-like structure. We also show that theoretical approaches based on topological constraints predict with good accuracy the presence of this folding intermediate. Overall, the derived results suggest that, as it occurs with non-disulfide bonded proteins, native-like interactions between segments of secondary structure rather than the crosslinking of disulfide bonds direct the folding of LCI.
The III-A intermediate constitutes the major rate-determining step in the oxidative folding of leech carboxypeptidase inhibitor (LCI). In this work, III-A has been directly purified from the folding reaction and structurally characterized by NMR spectroscopy. This species, containing three native disulfides, displays a highly native-like structure; however, it lacks some secondary structure elements, making it more flexible than native LCI. III-A represents a structurally determined example of a disulfide-insecure intermediate; direct oxidation of this species to the fully native protein seems to be restricted by the burial of its two free cysteine residues inside a native-like structure. We also show that theoretical approaches based on topological constraints predict with good accuracy the presence of this folding intermediate. Overall, the derived results suggest that, as it occurs with non-disulfide bonded proteins, native-like interactions between segments of secondary structure rather than the crosslinking of disulfide bonds direct the folding of LCI.
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==About this Structure==
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NMR structural characterization and computational predictions of the major intermediate in oxidative folding of leech carboxypeptidase inhibitor.,Arolas JL, D'Silva L, Popowicz GM, Aviles FX, Holak TA, Ventura S Structure. 2005 Aug;13(8):1193-202. PMID:16084391<ref>PMID:16084391</ref>
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1ZFI is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Hirudo_medicinalis Hirudo medicinalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZFI OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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NMR structural characterization and computational predictions of the major intermediate in oxidative folding of leech carboxypeptidase inhibitor., Arolas JL, D'Silva L, Popowicz GM, Aviles FX, Holak TA, Ventura S, Structure. 2005 Aug;13(8):1193-202. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=16084391 16084391]
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</div>
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<div class="pdbe-citations 1zfi" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Hirudo medicinalis]]
[[Category: Hirudo medicinalis]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Arolas, J L.]]
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[[Category: Arolas JL]]
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[[Category: Aviles, F X.]]
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[[Category: Aviles FX]]
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[[Category: Holak, T A.]]
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[[Category: D'Silva L]]
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[[Category: Popowicz, G M.]]
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[[Category: Holak TA]]
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[[Category: Silva, L D.]]
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[[Category: Popowicz GM]]
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[[Category: Ventura, S.]]
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[[Category: Ventura S]]
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[[Category: carboxypeptidase inhibitor]]
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[[Category: five-stranded antiparallel beta-sheet]]
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[[Category: one short alpha-helix]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:15:07 2008''
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Current revision

Solution structure of the leech carboxypeptidase inhibitor

PDB ID 1zfi

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