1zl0
From Proteopedia
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| - | [[Image:1zl0.gif|left|200px]]<br /><applet load="1zl0" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1zl0, resolution 1.10Å" /> | ||
| - | '''Structure of Protein of Unknown Function PA5198 from Pseudomonas aeruginosa'''<br /> | ||
| - | == | + | ==Structure of Protein of Unknown Function PA5198 from Pseudomonas aeruginosa== |
| - | + | <StructureSection load='1zl0' size='340' side='right'caption='[[1zl0]], [[Resolution|resolution]] 1.10Å' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[1zl0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZL0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZL0 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.1Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zl0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zl0 OCA], [https://pdbe.org/1zl0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zl0 RCSB], [https://www.ebi.ac.uk/pdbsum/1zl0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zl0 ProSAT], [https://www.topsan.org/Proteins/MCSG/1zl0 TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/LDC_PSEAE LDC_PSEAE] Releases the terminal D-alanine residue from the cytoplasmic disaccharide-tetrapeptide GlcNAc-MurNAc-L-Ala-gamma-D-Glu-meso-Dap-D-Ala, which is a murein turnover product. Probably also act on free tetrapetide. May be involved in murein recycling. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zl/1zl0_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zl0 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Pseudomonas aeruginosa]] | [[Category: Pseudomonas aeruginosa]] | ||
| - | + | [[Category: Edwards A]] | |
| - | [[Category: Edwards | + | [[Category: Evdokimova E]] |
| - | [[Category: Evdokimova | + | [[Category: Joachimiak A]] |
| - | [[Category: Joachimiak | + | [[Category: Osipiuk J]] |
| - | + | [[Category: Savchenko A]] | |
| - | [[Category: Osipiuk | + | |
| - | [[Category: Savchenko | + | |
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Current revision
Structure of Protein of Unknown Function PA5198 from Pseudomonas aeruginosa
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