This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3era

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:36, 3 April 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3era.png|left|200px]]
 
-
{{STRUCTURE_3era| PDB=3era | SCENE= }}
+
==RECOMBINANT ERABUTOXIN A (S8T MUTANT)==
-
 
+
<StructureSection load='3era' size='340' side='right'caption='[[3era]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
===RECOMBINANT ERABUTOXIN A (S8T MUTANT)===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3era]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Laticauda_semifasciata Laticauda semifasciata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ERA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ERA FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_10691969}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SCN:THIOCYANATE+ION'>SCN</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3era FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3era OCA], [https://pdbe.org/3era PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3era RCSB], [https://www.ebi.ac.uk/pdbsum/3era PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3era ProSAT]</span></td></tr>
-
[[3era]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Laticauda_semifasciata Laticauda semifasciata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ERA OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/3S1EA_LATSE 3S1EA_LATSE] Binds with high affinity to muscular nicotinic acetylcholine receptors (nAChRs) (tested on Torpedo marmorata, Kd=21 uM) and with low affinity to neuronal alpha-7/CHRNA7 nAChRs (tested on chimeric alpha-7/CHRNA7, Kd=0.07 nM) and inhibits acetylcholine from binding to the receptor, thereby impairing neuromuscular transmission (PubMed:7721859). Blocks the extracellular increase of dopamine evoked by nicotine at 4.2 uM concentrations (PubMed:9840221). In vivo, produces peripheral paralysis.<ref>PMID:7721859</ref> <ref>PMID:9305882</ref> <ref>PMID:9840221</ref>
-
<ref group="xtra">PMID:010691969</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/er/3era_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3era ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Laticauda semifasciata]]
[[Category: Laticauda semifasciata]]
-
[[Category: Arnoux, B.]]
+
[[Category: Arnoux B]]
-
[[Category: Ducruix, A.]]
+
[[Category: Ducruix A]]
-
[[Category: Gaucher, J F.]]
+
[[Category: Gaucher JF]]
-
[[Category: Menez, A.]]
+
[[Category: Menez A]]
-
[[Category: Menez, R.]]
+
[[Category: Menez R]]
-
[[Category: Neurotoxin]]
+
-
[[Category: Postsynaptic neurotoxin]]
+
-
[[Category: Snake neurotoxin]]
+
-
[[Category: Venom]]
+

Current revision

RECOMBINANT ERABUTOXIN A (S8T MUTANT)

PDB ID 3era

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools