4e0y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:18, 9 October 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4e0y.jpg|left|200px]]
 
-
{{STRUCTURE_4e0y| PDB=4e0y | SCENE= }}
+
==Protelomerase tela covalently complexed with mutated substrate DNA==
 +
<StructureSection load='4e0y' size='340' side='right'caption='[[4e0y]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4e0y]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4E0Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4E0Y FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4e0y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4e0y OCA], [https://pdbe.org/4e0y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4e0y RCSB], [https://www.ebi.ac.uk/pdbsum/4e0y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4e0y ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q7CWV1_AGRFC Q7CWV1_AGRFC]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Hairpin telomeres of bacterial linear chromosomes are generated by a DNA cutting-rejoining enzyme protelomerase. Protelomerase resolves a concatenated dimer of chromosomes as the last step of chromosome replication, converting a palindromic DNA sequence at the junctions between chromosomes into covalently closed hairpins. The mechanism by which protelomerase transforms a duplex DNA substrate into the hairpin telomeres remains largely unknown. We report here a series of crystal structures of the protelomerase TelA bound to DNA that represent distinct stages along the reaction pathway. The structures suggest that TelA converts a linear duplex substrate into hairpin turns via a transient strand-refolding intermediate that involves DNA-base flipping and wobble base-pairs. The extremely compact di-nucleotide hairpin structure of the product is fully stabilized by TelA prior to strand ligation, which drives the reaction to completion. The enzyme-catalyzed, multistep strand refolding is a novel mechanism in DNA rearrangement reactions.
-
===Protelomerase tela covalently complexed with mutated substrate DNA===
+
An enzyme-catalyzed multistep DNA refolding mechanism in hairpin telomere formation.,Shi K, Huang WM, Aihara H PLoS Biol. 2013 Jan;11(1):e1001472. doi: 10.1371/journal.pbio.1001472. Epub 2013 , Jan 29. PMID:23382649<ref>PMID:23382649</ref>
-
{{ABSTRACT_PUBMED_23382649}}
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
==About this Structure==
+
<div class="pdbe-citations 4e0y" style="background-color:#fffaf0;"></div>
-
[[4e0y]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._c58 Agrobacterium fabrum str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4E0Y OCA].
+
== References ==
-
[[Category: Agrobacterium fabrum str. c58]]
+
<references/>
-
[[Category: Aihara, H.]]
+
__TOC__
-
[[Category: Shi, K.]]
+
</StructureSection>
-
[[Category: Dna binding protein-dna complex]]
+
[[Category: Agrobacterium fabrum str. C58]]
-
[[Category: Protelemorase]]
+
[[Category: Large Structures]]
 +
[[Category: Aihara H]]
 +
[[Category: Shi K]]

Current revision

Protelomerase tela covalently complexed with mutated substrate DNA

PDB ID 4e0y

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools