3fef

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:48, 21 November 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3fef.png|left|200px]]
 
-
{{STRUCTURE_3fef| PDB=3fef | SCENE= }}
+
==Crystal structure of putative glucosidase lplD from bacillus subtilis==
-
 
+
<StructureSection load='3fef' size='340' side='right'caption='[[3fef]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
===Crystal structure of putative glucosidase lplD from bacillus subtilis===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FEF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FEF FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[3fef]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FEF OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fef FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fef OCA], [https://pdbe.org/3fef PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fef RCSB], [https://www.ebi.ac.uk/pdbsum/3fef PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fef ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3fef TOPSAN]</span></td></tr>
-
[[Category: Bacillus subtilis]]
+
</table>
-
[[Category: Almo, S C.]]
+
== Evolutionary Conservation ==
-
[[Category: Burley, S K.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
Check<jmol>
-
[[Category: Rajashankar, K R.]]
+
<jmolCheckbox>
-
[[Category: Ramagopal, U A.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fe/3fef_consurf.spt"</scriptWhenChecked>
-
[[Category: Toro, R.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Glycosidase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Gulosidase]]
+
</jmolCheckbox>
-
[[Category: Hydrolase]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fef ConSurf].
-
[[Category: Lpld]]
+
<div style="clear:both"></div>
-
[[Category: Manganese]]
+
__TOC__
-
[[Category: Metal-binding]]
+
</StructureSection>
-
[[Category: Nad]]
+
[[Category: Large Structures]]
-
[[Category: New york sgx research center for structural genomic]]
+
[[Category: Almo SC]]
-
[[Category: Nysgxrc]]
+
[[Category: Burley SK]]
-
[[Category: Protein structure initiative]]
+
[[Category: Rajashankar KR]]
-
[[Category: Psi-2]]
+
[[Category: Ramagopal UA]]
-
[[Category: Structural genomic]]
+
[[Category: Toro R]]
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of putative glucosidase lplD from bacillus subtilis

PDB ID 3fef

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3fef"
Personal tools