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3fif

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[[Image:3fif.png|left|200px]]
 
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{{STRUCTURE_3fif| PDB=3fif | SCENE= }}
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==Crystal structure of the ygdR protein from E.coli. Northeast Structural Genomics target ER382A.==
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<StructureSection load='3fif' size='340' side='right'caption='[[3fif]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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===Crystal structure of the ygdR protein from E.coli. Northeast Structural Genomics target ER382A.===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3fif]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FIF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FIF FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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==About this Structure==
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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[[3fif]] is a 9 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FIF OCA].
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fif FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fif OCA], [https://pdbe.org/3fif PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fif RCSB], [https://www.ebi.ac.uk/pdbsum/3fif PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fif ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/YGDR_ECOLI YGDR_ECOLI]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fi/3fif_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fif ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Escherichia coli k-12]]
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[[Category: Escherichia coli K-12]]
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[[Category: Acton, T B.]]
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[[Category: Large Structures]]
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[[Category: Baran, M.]]
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[[Category: Acton TB]]
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[[Category: Chen, C X.]]
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[[Category: Baran M]]
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[[Category: Cunningham, K.]]
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[[Category: Chen CX]]
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[[Category: Hunt, J F.]]
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[[Category: Cunningham K]]
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[[Category: Jiang, M.]]
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[[Category: Hunt JF]]
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[[Category: Kuzin, A P.]]
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[[Category: Jiang M]]
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[[Category: Liu, J C.]]
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[[Category: Kuzin AP]]
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[[Category: Ma, L.]]
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[[Category: Liu JC]]
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[[Category: Montelione, G T.]]
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[[Category: Ma L]]
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[[Category: NESG, Northeast Structural Genomics Consortium.]]
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[[Category: Montelione GT]]
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[[Category: Rossi, P.]]
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[[Category: Rossi P]]
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[[Category: Rost, B.]]
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[[Category: Rost B]]
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[[Category: Seetharaman, J.]]
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[[Category: Seetharaman J]]
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[[Category: Su, M.]]
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[[Category: Su M]]
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[[Category: Swapna, G V.T.]]
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[[Category: Swapna GVT]]
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[[Category: Tong, L.]]
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[[Category: Tong L]]
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[[Category: Xiao, R.]]
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[[Category: Xiao R]]
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[[Category: Cell membrane]]
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[[Category: Lipoprotein]]
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[[Category: Membrane]]
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[[Category: Northeast structural genomics consortium]]
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[[Category: Palmitate]]
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[[Category: Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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[[Category: Unknown function]]
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[[Category: Ygdr ygdr_ecoli nesg x-ray structure]]
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Current revision

Crystal structure of the ygdR protein from E.coli. Northeast Structural Genomics target ER382A.

PDB ID 3fif

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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