This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3sng

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:02, 14 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3sng.png|left|200px]]
 
-
{{STRUCTURE_3sng| PDB=3sng | SCENE= }}
+
==X-ray structure of fully glycosylated bifunctional nuclease TBN1 from Solanum lycopersicum (Tomato)==
-
 
+
<StructureSection load='3sng' size='340' side='right'caption='[[3sng]], [[Resolution|resolution]] 2.16&Aring;' scene=''>
-
===X-ray structure of fully glycosylated bifunctional nuclease TBN1 from Solanum lycopersicum (Tomato)===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3sng]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Solanum_lycopersicum Solanum lycopersicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SNG FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_23385457}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.16&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sng OCA], [https://pdbe.org/3sng PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sng RCSB], [https://www.ebi.ac.uk/pdbsum/3sng PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sng ProSAT]</span></td></tr>
-
[[3sng]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Solanum_lycopersicum Solanum lycopersicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SNG OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q0KFV0_SOLLC Q0KFV0_SOLLC]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Solanum lycopersicum]]
[[Category: Solanum lycopersicum]]
-
[[Category: Dohnalek, J.]]
+
[[Category: Dohnalek J]]
-
[[Category: Duskova, J.]]
+
[[Category: Duskova J]]
-
[[Category: Hasek, J.]]
+
[[Category: Hasek J]]
-
[[Category: Koval, T.]]
+
[[Category: Koval T]]
-
[[Category: Lipovova, P.]]
+
[[Category: Lipovova P]]
-
[[Category: Matousek, J.]]
+
[[Category: Matousek J]]
-
[[Category: Podzimek, T.]]
+
[[Category: Podzimek T]]
-
[[Category: Skalova, T.]]
+
[[Category: Skalova T]]
-
[[Category: Stepankova, A.]]
+
[[Category: Stepankova A]]
-
[[Category: 3'-nucleotidase]]
+
-
[[Category: Bi-functional]]
+
-
[[Category: Cytosol membrane associated]]
+
-
[[Category: Endonuclease]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Mainly alpha helical]]
+
-
[[Category: Mononucleotide]]
+
-
[[Category: Nucleic acid]]
+
-
[[Category: Trinuclear metal centre]]
+

Current revision

X-ray structure of fully glycosylated bifunctional nuclease TBN1 from Solanum lycopersicum (Tomato)

PDB ID 3sng

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools