This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2a3s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:15, 15 May 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2a3s.gif|left|200px]]<br /><applet load="2a3s" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2a3s" />
 
-
'''Solution structure and Dynamics of DNA-Binding Domain of Myocyte Nuclear Factor'''<br />
 
-
==About this Structure==
+
==Solution structure and Dynamics of DNA-Binding Domain of Myocyte Nuclear Factor==
-
2A3S is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A3S OCA].
+
<StructureSection load='2a3s' size='340' side='right'caption='[[2a3s]]' scene=''>
-
[[Category: Mus musculus]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2a3s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A3S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2A3S FirstGlance]. <br>
-
[[Category: Chang, C H.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
[[Category: Chu, Y P.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2a3s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a3s OCA], [https://pdbe.org/2a3s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2a3s RCSB], [https://www.ebi.ac.uk/pdbsum/2a3s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2a3s ProSAT]</span></td></tr>
-
[[Category: Chuang, W J.]]
+
</table>
-
[[Category: Jeng, W Y.]]
+
== Function ==
-
[[Category: dna-binding domain]]
+
[https://www.uniprot.org/uniprot/FOXK1_MOUSE FOXK1_MOUSE] Transcriptional regulator that binds to the upstream enhancer region (CCAC box) of myoglobin gene. Has a role in myogenic differentiation and in remodeling processes of adult muscles that occur in response to physiological stimuli.<ref>PMID:8007964</ref> <ref>PMID:9271401</ref>
-
[[Category: forkhead]]
+
== Evolutionary Conservation ==
-
[[Category: nmr]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: winged-helix]]
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a3/2a3s_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2a3s ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:23:18 2008''
+
==See Also==
 +
*[[FOX 3D structures|FOX 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Mus musculus]]
 +
[[Category: Chang C-H]]
 +
[[Category: Chu Y-P]]
 +
[[Category: Chuang W-J]]
 +
[[Category: Jeng W-Y]]

Current revision

Solution structure and Dynamics of DNA-Binding Domain of Myocyte Nuclear Factor

PDB ID 2a3s

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools