This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3g8q

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:53, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3g8q.png|left|200px]]
 
-
{{STRUCTURE_3g8q| PDB=3g8q | SCENE= }}
+
==A cytidine deaminase edits C-to-U in transfer RNAs in archaea==
-
 
+
<StructureSection load='3g8q' size='340' side='right'caption='[[3g8q]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
===A cytidine deaminase edits C-to-U in transfer RNAs in archaea===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3g8q]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanopyrus_kandleri Methanopyrus kandleri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G8Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G8Q FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_19407206}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g8q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g8q OCA], [https://pdbe.org/3g8q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g8q RCSB], [https://www.ebi.ac.uk/pdbsum/3g8q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g8q ProSAT]</span></td></tr>
-
[[3g8q]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanopyrus_kandleri Methanopyrus kandleri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G8Q OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/CDAT8_METKA CDAT8_METKA] Catalyzes the deamimation of cytosine to uracil at position 8 of tRNA in 30 different tRNAs. This editing guarantees the proper folding and functionality of the tRNAs.<ref>PMID:19407206</ref>
-
<ref group="xtra">PMID:019407206</ref><references group="xtra"/>
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Methanopyrus kandleri]]
[[Category: Methanopyrus kandleri]]
-
[[Category: Stanley, B J.]]
+
[[Category: Stanley BJ]]
-
[[Category: Xiong, Y.]]
+
[[Category: Xiong Y]]
-
[[Category: Cytidine deaminase]]
+
-
[[Category: Ferredoxin-like domain]]
+
-
[[Category: Rna binding protein]]
+
-
[[Category: Thump]]
+

Current revision

A cytidine deaminase edits C-to-U in transfer RNAs in archaea

PDB ID 3g8q

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3g8q"
Personal tools