3g5t

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[[Image:3g5t.png|left|200px]]
 
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{{STRUCTURE_3g5t| PDB=3g5t | SCENE= }}
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==Crystal structure of trans-aconitate 3-methyltransferase from yeast==
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<StructureSection load='3g5t' size='340' side='right'caption='[[3g5t]], [[Resolution|resolution]] 1.12&Aring;' scene=''>
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===Crystal structure of trans-aconitate 3-methyltransferase from yeast===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3g5t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G5T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G5T FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.119&#8491;</td></tr>
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==About this Structure==
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=T8N:(2E)-2-(2-METHOXY-2-OXOETHYL)BUT-2-ENEDIOIC+ACID'>T8N</scene></td></tr>
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[[3g5t]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G5T OCA].
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g5t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g5t OCA], [https://pdbe.org/3g5t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g5t RCSB], [https://www.ebi.ac.uk/pdbsum/3g5t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g5t ProSAT], [https://www.topsan.org/Proteins/CESG/3g5t TOPSAN]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TMT1_YEAST TMT1_YEAST] Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate and 3-isopropylmalate at high affinity and of other molecules like cis-aconitate, isocitrate, and citrate at lower velocities and affinities. The function of trans-aconitate methylation appears to be in reducing the toxicity of this spontaneous breakdown product of cis-aconitate. The role of 3-isopropylmalate methylation is unclear but may represent a metabolic branch at 3-isopropylmalate, where some of the material is taken in the pathway leading to leucine and some is taken in a pathway to the 3-isopropylmalate methyl ester, a molecule that provides a signal to switch from vegetative to invasive growth in response to amino acid starvation.<ref>PMID:11695919</ref> <ref>PMID:15147181</ref> <ref>PMID:18092814</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g5/3g5t_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3g5t ConSurf].
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<div style="clear:both"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
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[[Category: Trans-aconitate 3-methyltransferase]]
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[[Category: Bingman CA]]
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[[Category: Bingman, C A.]]
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[[Category: Burgie ES]]
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[[Category: Burgie, E S.]]
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[[Category: Phillips Jr GN]]
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[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
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[[Category: Wesenberg GE]]
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[[Category: Phillips, G N.]]
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[[Category: Wesenberg, G E.]]
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[[Category: Center for eukaryotic structural genomic]]
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[[Category: Cesg]]
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[[Category: Methyltransferase]]
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[[Category: Phosphoprotein]]
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[[Category: Protein structure initiative]]
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[[Category: Psi]]
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[[Category: S-adenosyl-l-methionine]]
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[[Category: Structural genomic]]
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[[Category: Transferase]]
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Current revision

Crystal structure of trans-aconitate 3-methyltransferase from yeast

PDB ID 3g5t

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