3fwz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3fwz" [edit=sysop:move=sysop])
Current revision (01:49, 21 November 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3fwz.png|left|200px]]
 
-
{{STRUCTURE_3fwz| PDB=3fwz | SCENE= }}
+
==Crystal structure of TrkA-N domain of inner membrane protein ybaL from Escherichia coli==
-
 
+
<StructureSection load='3fwz' size='340' side='right'caption='[[3fwz]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
-
===Crystal structure of TrkA-N domain of inner membrane protein ybaL from Escherichia coli===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3fwz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FWZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FWZ FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[3fwz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FWZ OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fwz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fwz OCA], [https://pdbe.org/3fwz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fwz RCSB], [https://www.ebi.ac.uk/pdbsum/3fwz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fwz ProSAT], [https://www.topsan.org/Proteins/MCSG/3fwz TOPSAN]</span></td></tr>
-
[[Category: Escherichia coli k-12]]
+
</table>
-
[[Category: Bigelow, L.]]
+
== Function ==
-
[[Category: Buck, K.]]
+
[https://www.uniprot.org/uniprot/YBAL_ECOLI YBAL_ECOLI]
-
[[Category: Chang, C.]]
+
== Evolutionary Conservation ==
-
[[Category: Joachimiak, A.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
Check<jmol>
-
[[Category: Antiport]]
+
<jmolCheckbox>
-
[[Category: Cell inner membrane]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fw/3fwz_consurf.spt"</scriptWhenChecked>
-
[[Category: Cell membrane]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: E coli]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Ion transport]]
+
</jmolCheckbox>
-
[[Category: Mcsg]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fwz ConSurf].
-
[[Category: Membrane]]
+
<div style="clear:both"></div>
-
[[Category: Membrane protein]]
+
__TOC__
-
[[Category: Midwest center for structural genomic]]
+
</StructureSection>
-
[[Category: Protein structure initiative]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: Psi-2]]
+
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
+
[[Category: Bigelow L]]
-
[[Category: Transmembrane]]
+
[[Category: Buck K]]
-
[[Category: Transport]]
+
[[Category: Chang C]]
-
[[Category: Trka-n domain]]
+
[[Category: Joachimiak A]]
-
[[Category: Ybal]]
+

Current revision

Crystal structure of TrkA-N domain of inner membrane protein ybaL from Escherichia coli

PDB ID 3fwz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools