This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3fzb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3fzb" [edit=sysop:move=sysop])
Current revision (09:51, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3fzb.png|left|200px]]
 
-
{{STRUCTURE_3fzb| PDB=3fzb | SCENE= }}
+
==Crystal structure of the tail terminator protein from phage lambda (gpU-WT)==
-
 
+
<StructureSection load='3fzb' size='340' side='right'caption='[[3fzb]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
===Crystal structure of the tail terminator protein from phage lambda (gpU-WT)===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3fzb]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_Lambda Escherichia virus Lambda]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FZB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FZB FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_19426744}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fzb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fzb OCA], [https://pdbe.org/3fzb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fzb RCSB], [https://www.ebi.ac.uk/pdbsum/3fzb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fzb ProSAT]</span></td></tr>
-
[[3fzb]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_lambda Enterobacteria phage lambda]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FZB OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/TTTP_LAMBD TTTP_LAMBD] Plays an essential role in tail assembly by capping the rapidly polymerizing tail once it has reached its requisite length and serving as the interaction surface for the completion protein.<ref>PMID:2150582</ref>
-
<ref group="xtra">PMID:019426744</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Enterobacteria phage lambda]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Davidson, A R.]]
+
Check<jmol>
-
[[Category: Donaldson, L W.]]
+
<jmolCheckbox>
-
[[Category: Edmonds, E.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fz/3fzb_consurf.spt"</scriptWhenChecked>
-
[[Category: Howell, P L.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Liu, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Pell, L G.]]
+
</jmolCheckbox>
-
[[Category: Mixed alpha-beta fold]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fzb ConSurf].
-
[[Category: Viral protein]]
+
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Escherichia virus Lambda]]
 +
[[Category: Large Structures]]
 +
[[Category: Davidson AR]]
 +
[[Category: Donaldson LW]]
 +
[[Category: Edmonds E]]
 +
[[Category: Howell PL]]
 +
[[Category: Liu A]]
 +
[[Category: Pell LG]]

Current revision

Crystal structure of the tail terminator protein from phage lambda (gpU-WT)

PDB ID 3fzb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools