This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3gbv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:01, 9 March 2022) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3gbv.png|left|200px]]
 
-
{{STRUCTURE_3gbv| PDB=3gbv | SCENE= }}
+
==Crystal structure of a putative LacI transcriptional regulator from Bacteroides fragilis==
-
 
+
<StructureSection load='3gbv' size='340' side='right'caption='[[3gbv]]' scene=''>
-
===Crystal structure of a putative LacI transcriptional regulator from Bacteroides fragilis===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GBV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GBV FirstGlance]. <br>
-
 
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gbv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gbv OCA], [https://pdbe.org/3gbv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gbv RCSB], [https://www.ebi.ac.uk/pdbsum/3gbv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gbv ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gbv TOPSAN]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[3gbv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis Bacteroides fragilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GBV OCA].
+
== Evolutionary Conservation ==
-
[[Category: Bacteroides fragilis]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Burley, S K.]]
+
Check<jmol>
-
[[Category: Ibrahim, B Syed.]]
+
<jmolCheckbox>
-
[[Category: Kumaran, D.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gb/3gbv_consurf.spt"</scriptWhenChecked>
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Swaminathan, S.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: 11231j]]
+
</jmolCheckbox>
-
[[Category: Dna-binding]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gbv ConSurf].
-
[[Category: New york sgx research center for structural genomic]]
+
<div style="clear:both"></div>
-
[[Category: New york structural genomix research consortium]]
+
__TOC__
-
[[Category: Nysgxrc]]
+
</StructureSection>
-
[[Category: Protein structure initiative]]
+
[[Category: Large Structures]]
-
[[Category: Psi-ii]]
+
[[Category: Burley SK]]
-
[[Category: Structural genomic]]
+
[[Category: Kumaran D]]
-
[[Category: Transcription]]
+
[[Category: Swaminathan S]]
-
[[Category: Transcription regulation]]
+
[[Category: Syed Ibrahim B]]
-
[[Category: Transcription regulator]]
+
-
[[Category: Transcriptional regulator]]
+

Current revision

Crystal structure of a putative LacI transcriptional regulator from Bacteroides fragilis

PDB ID 3gbv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3gbv"
Personal tools