2ahs

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[[Image:2ahs.gif|left|200px]]<br /><applet load="2ahs" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="2ahs, resolution 2.10&Aring;" />
 
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'''Crystal Structure of the Catalytic Domain of Human Tyrosine Receptor Phosphatase Beta'''<br />
 
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==About this Structure==
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==Crystal Structure of the Catalytic Domain of Human Tyrosine Receptor Phosphatase Beta==
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2AHS is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=CL:'>CL</scene>, <scene name='pdbligand=NA:'>NA</scene> and <scene name='pdbligand=EDO:'>EDO</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Protein-tyrosine-phosphatase Protein-tyrosine-phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.48 3.1.3.48] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AHS OCA].
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<StructureSection load='2ahs' size='340' side='right'caption='[[2ahs]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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[[Category: Homo sapiens]]
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== Structural highlights ==
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[[Category: Protein-tyrosine-phosphatase]]
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<table><tr><td colspan='2'>[[2ahs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AHS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AHS FirstGlance]. <br>
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[[Category: Single protein]]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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[[Category: Arrowsmith, C.]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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[[Category: Ball, L.]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ahs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ahs OCA], [https://pdbe.org/2ahs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ahs RCSB], [https://www.ebi.ac.uk/pdbsum/2ahs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ahs ProSAT]</span></td></tr>
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[[Category: Barr, A.]]
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</table>
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[[Category: Bray, J.]]
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== Function ==
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[[Category: Bunkoczi, G.]]
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[https://www.uniprot.org/uniprot/PTPRB_HUMAN PTPRB_HUMAN] Plays an important role in blood vessel remodeling and angiogenesis. Not necessary for the initial formation of blood vessels, but is essential for their maintenance and remodeling. Can induce dephosphorylation of TEK/TIE2, CDH5/VE-cadherin and KDR/VEGFR-2. Regulates angiopoietin-TIE2 signaling in endothelial cells. Acts as a negative regulator of TIE2, and controls TIE2 driven endothelial cell proliferation, which in turn affects blood vessel remodeling during embryonic development and determines blood vessel size during perinatal growth. Essential for the maintenance of endothelial cell contact integrity and for the adhesive function of VE-cadherin in endothelial cells and this requires the presence of plakoglobin (By similarity).<ref>PMID:19116766</ref> <ref>PMID:19136612</ref>
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[[Category: Burgess, N.]]
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== Evolutionary Conservation ==
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[[Category: Das, S.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Debreczeni, J.]]
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Check<jmol>
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[[Category: Delft, F von.]]
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<jmolCheckbox>
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[[Category: Edwards, A.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ah/2ahs_consurf.spt"</scriptWhenChecked>
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[[Category: Eswaran, J.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Gileadi, O.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Knapp, S.]]
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</jmolCheckbox>
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[[Category: SGC, Structural Genomics Consortium.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ahs ConSurf].
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[[Category: Sobott, F.]]
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<div style="clear:both"></div>
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[[Category: Sundstrom, M.]]
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<div style="background-color:#fffaf0;">
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[[Category: Turnbull, A.]]
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== Publication Abstract from PubMed ==
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[[Category: Ugochukwu, E.]]
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Protein tyrosine phosphatases (PTPs) play a critical role in regulating cellular functions by selectively dephosphorylating their substrates. Here we present 22 human PTP crystal structures that, together with prior structural knowledge, enable a comprehensive analysis of the classical PTP family. Despite their largely conserved fold, surface properties of PTPs are strikingly diverse. A potential secondary substrate-binding pocket is frequently found in phosphatases, and this has implications for both substrate recognition and development of selective inhibitors. Structural comparison identified four diverse catalytic loop (WPD) conformations and suggested a mechanism for loop closure. Enzymatic assays revealed vast differences in PTP catalytic activity and identified PTPD1, PTPD2, and HDPTP as catalytically inert protein phosphatases. We propose a "head-to-toe" dimerization model for RPTPgamma/zeta that is distinct from the "inhibitory wedge" model and that provides a molecular basis for inhibitory regulation. This phosphatome resource gives an expanded insight into intrafamily PTP diversity, catalytic activity, substrate recognition, and autoregulatory self-association.
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[[Category: Weigel, J.]]
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[[Category: CL]]
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[[Category: EDO]]
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[[Category: NA]]
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[[Category: beta]]
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[[Category: human]]
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[[Category: sgc]]
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[[Category: structural genomics]]
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[[Category: structural genomics consortium]]
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[[Category: tyrosine receptor phosphatase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:27:30 2008''
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Large-scale structural analysis of the classical human protein tyrosine phosphatome.,Barr AJ, Ugochukwu E, Lee WH, King ON, Filippakopoulos P, Alfano I, Savitsky P, Burgess-Brown NA, Muller S, Knapp S Cell. 2009 Jan 23;136(2):352-63. PMID:19167335<ref>PMID:19167335</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 2ahs" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Tyrosine phosphatase 3D structures|Tyrosine phosphatase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Arrowsmith C]]
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[[Category: Ball L]]
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[[Category: Barr A]]
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[[Category: Bray J]]
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[[Category: Bunkoczi G]]
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[[Category: Burgess N]]
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[[Category: Das S]]
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[[Category: Debreczeni J]]
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[[Category: Edwards A]]
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[[Category: Eswaran J]]
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[[Category: Gileadi O]]
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[[Category: Knapp S]]
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[[Category: Sobott F]]
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[[Category: Sundstrom M]]
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[[Category: Turnbull A]]
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[[Category: Ugochukwu E]]
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[[Category: Weigelt J]]
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[[Category: Von Delft F]]

Current revision

Crystal Structure of the Catalytic Domain of Human Tyrosine Receptor Phosphatase Beta

PDB ID 2ahs

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