This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3gqq
From Proteopedia
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:3gqq.png|left|200px]] | ||
| - | + | ==Crystal structure of the human retinal protein 4 (unc-119 homolog A). Northeast Structural Genomics Consortium target HR3066a== | |
| + | <StructureSection load='3gqq' size='340' side='right'caption='[[3gqq]], [[Resolution|resolution]] 1.94Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3gqq]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GQQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GQQ FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr> | ||
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RG4, UNC119 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gqq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gqq OCA], [https://pdbe.org/3gqq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gqq RCSB], [https://www.ebi.ac.uk/pdbsum/3gqq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gqq ProSAT], [https://www.topsan.org/Proteins/NESGC/3gqq TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Disease == | ||
| + | [[https://www.uniprot.org/uniprot/U119A_HUMAN U119A_HUMAN]] Idiopathic CD4 lymphocytopenia;Cone rod dystrophy. Defects in UNC119 may be a cause of cone-rod dystrophy. A mutation was found in a 57-year-old woman with late-onset cone-rod dystrophy: from 40 year old, the patient suffered from poor night vision, defective color vision and light-sensitivity. At 57 year old, she displayed reduced visual acuity, myopa, macular atrophy and pericentral ring scotomas. The disease was caused by a heterozygous mutation causing premature termination and truncated UNC119 protein with dominant-negative effect. | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/U119A_HUMAN U119A_HUMAN]] Myristoyl-binding protein that acts as a cargo adapter: specifically binds the myristoyl moiety of a subset of N-terminally myristoylated proteins and is required for their localization. Binds myristoylated GNAT1 and is required for G-protein localization and trafficking in sensory neurons. Binds myristoylated NPHP3; however, in contrast to UNC119B, does not seem to play a major role in ciliary membrane localization of NPHP3. Does not bind all myristoylated proteins. Probably plays a role in trafficking proteins in photoreceptor cells.<ref>PMID:22085962</ref> <ref>PMID:21642972</ref> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/3gqq_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gqq ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | == | + | ==See Also== |
| - | + | *[[3D structures of vascular endothelial growth factor receptor|3D structures of vascular endothelial growth factor receptor]] | |
| - | + | == References == | |
| - | == | + | <references/> |
| - | + | __TOC__ | |
| - | [[Category: | + | </StructureSection> |
| - | [[Category: Acton, T B | + | [[Category: Human]] |
| - | [[Category: Chen, Y | + | [[Category: Large Structures]] |
| - | [[Category: Ciccosanti, C | + | [[Category: Acton, T B]] |
| - | [[Category: Foote, E L | + | [[Category: Chen, Y]] |
| - | [[Category: Hunt, J F | + | [[Category: Ciccosanti, C]] |
| - | [[Category: Montelione, G T | + | [[Category: Foote, E L]] |
| - | [[Category: | + | [[Category: Hunt, J F]] |
| - | [[Category: Sahdev, S | + | [[Category: Montelione, G T]] |
| - | [[Category: Seetharaman, J | + | [[Category: Structural genomic]] |
| - | [[Category: Shastry, R | + | [[Category: Sahdev, S]] |
| - | [[Category: Tong, L | + | [[Category: Seetharaman, J]] |
| - | [[Category: Vorobiev, S M | + | [[Category: Shastry, R]] |
| - | [[Category: Xiao, R | + | [[Category: Tong, L]] |
| + | [[Category: Vorobiev, S M]] | ||
| + | [[Category: Xiao, R]] | ||
| + | [[Category: Alternative splicing]] | ||
[[Category: Hr3066a]] | [[Category: Hr3066a]] | ||
[[Category: Hrg4]] | [[Category: Hrg4]] | ||
[[Category: Human retinal protein 4]] | [[Category: Human retinal protein 4]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
| - | [[Category: Northeast structural genomics consortium]] | ||
[[Category: Phosphoprotein]] | [[Category: Phosphoprotein]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
[[Category: Sensory transduction]] | [[Category: Sensory transduction]] | ||
[[Category: Splicing]] | [[Category: Splicing]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: U119a_human]] | [[Category: U119a_human]] | ||
[[Category: Unc-119 homolog some]] | [[Category: Unc-119 homolog some]] | ||
[[Category: Vision]] | [[Category: Vision]] | ||
Current revision
Crystal structure of the human retinal protein 4 (unc-119 homolog A). Northeast Structural Genomics Consortium target HR3066a
| |||||||||||
Categories: Human | Large Structures | Acton, T B | Chen, Y | Ciccosanti, C | Foote, E L | Hunt, J F | Montelione, G T | Structural genomic | Sahdev, S | Seetharaman, J | Shastry, R | Tong, L | Vorobiev, S M | Xiao, R | Alternative splicing | Hr3066a | Hrg4 | Human retinal protein 4 | Nesg | Phosphoprotein | PSI, Protein structure initiative | Sensory transduction | Splicing | U119a human | Unc-119 homolog some | Vision

