This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3h1q
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:3h1q.png|left|200px]] | ||
| - | + | ==Crystal structure of ethanolamine utilization protein EutJ from Carboxydothermus hydrogenoformans== | |
| - | + | <StructureSection load='3h1q' size='340' side='right'caption='[[3h1q]], [[Resolution|resolution]] 2.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3h1q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Carhz Carhz]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H1Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H1Q FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene></td></tr> | |
| - | == | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[3h1q]] is a 2 chain structure with sequence from [ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">eutJ, CHY_0686 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=246194 CARHZ])</td></tr> |
| - | [[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h1q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h1q OCA], [https://pdbe.org/3h1q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h1q RCSB], [https://www.ebi.ac.uk/pdbsum/3h1q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h1q ProSAT], [https://www.topsan.org/Proteins/MCSG/3h1q TOPSAN]</span></td></tr> |
| - | [[Category: Chang, C | + | </table> |
| - | [[Category: Jedrzejczak, R | + | == Evolutionary Conservation == |
| - | [[Category: Joachimiak, A | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: Kerfeld, C | + | Check<jmol> |
| - | [[Category: Kinney, J | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h1/3h1q_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Tesar, C | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h1q ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Carhz]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Chang, C]] | ||
| + | [[Category: Jedrzejczak, R]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Kerfeld, C]] | ||
| + | [[Category: Kinney, J]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Tesar, C]] | ||
[[Category: Carboxydothermus hydrogenoforman]] | [[Category: Carboxydothermus hydrogenoforman]] | ||
[[Category: Ethanolamine utilization protein eutj]] | [[Category: Ethanolamine utilization protein eutj]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Structural protein]] | [[Category: Structural protein]] | ||
Current revision
Crystal structure of ethanolamine utilization protein EutJ from Carboxydothermus hydrogenoformans
| |||||||||||

